{"id":"W1978010649","doi":"10.4161/pri.21866","title":"The identification of candidate genes and SNP markers for classical bovine spongiform encephalopathy susceptibility","year":2012,"lang":"en","type":"article","venue":"Prion","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Bovine spongiform encephalopathy; Biology; PRNP; Genetics; Single-nucleotide polymorphism; SNP; Candidate gene; Gene; Virology; Allele; Disease; Genotype; Prion protein; Medicine; Pathology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005711978,0.00005913982,0.0000566971,0.000009614103,0.0001045591,0.0000151312,0.00007483466,0.00004875628,0.000003551877],"category_scores_gemma":[0.0001549711,0.00004332294,0.00004715532,0.00002547272,0.00006879446,0.00000627678,0.00005368475,0.00002124691,7.228051e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006813738,"about_ca_system_score_gemma":0.00002265372,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007522133,"about_ca_topic_score_gemma":0.00002101735,"domain_scores_codex":[0.9994712,0.00003276164,0.0001678915,0.0001250321,0.00006051573,0.0001425304],"domain_scores_gemma":[0.9995976,0.00002458885,0.00009100889,0.0001836671,0.00004669845,0.00005642678],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004043215,0.00002886113,0.028334,0.00004055566,0.00001566259,2.691172e-8,0.00002985568,8.51719e-7,0.7846062,0.0002208903,0.0002166737,0.1861022],"study_design_scores_gemma":[0.0005564912,0.0002616017,0.1609053,0.00001359261,0.00004886061,0.00000437632,0.0001478755,0.0004703045,0.7267869,0.0004415159,0.1101811,0.0001820495],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.984479,0.0127486,0.002203292,0.0001435969,0.0001060167,0.0002644173,0.00002695624,0.000003838538,0.0000243498],"genre_scores_gemma":[0.9965041,0.002985271,0.0002176055,0.00001852392,0.0001225508,0.00003047608,0.00005045781,0.000005910551,0.00006511853],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1859201,"threshold_uncertainty_score":0.1766658,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01416115316319093,"score_gpt":0.2805133152422195,"score_spread":0.2663521620790286,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}