{"id":"W1978486201","doi":"10.3855/jidc.157","title":"Typhi genes expressed during infection or involved in pathogenesis","year":2008,"lang":"en","type":"review","venue":"The Journal of Infection in Developing Countries","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Typhoid fever; Salmonella typhi; Biology; Pathogen; Gene; Human pathogen; Virulence; Salmonella enterica; Microbiology; Virology; Pathogenesis; Salmonella; Immunology; Genetics; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002343994,0.0006764644,0.001015016,0.001440939,0.0001574489,0.0005223161,0.0005172789,0.0005908661,0.00205946],"category_scores_gemma":[0.0003535151,0.0001936684,0.0002895686,0.00172797,0.0002954553,0.0006735736,0.0003027121,0.0006232098,0.002029878],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000393699,"about_ca_system_score_gemma":0.000718475,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001001802,"about_ca_topic_score_gemma":0.001243852,"domain_scores_codex":[0.9998996,0.00001452622,0.00001485305,0.00001979539,0.0000387849,0.00001243678],"domain_scores_gemma":[0.9998777,0.0000443481,0.00002345602,0.000003752365,0.00003943788,0.00001128082],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001437276,0.00005312722,0.0004583018,0.01446792,0.00005304379,0.0003826094,0.00008069982,0.0003095541,0.009071413,0.001289794,0.01247576,0.9612139],"study_design_scores_gemma":[0.00001790063,0.0001336101,0.00324124,0.002729925,0.0001049398,0.00246112,0.0001132029,0.00007326391,0.003169482,0.0007866013,0.9871505,0.00001831528],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0005490619,0.9973073,0.0001907847,0.0001307136,0.0001564902,0.00000584502,0.00004415263,0.00001077145,0.001604955],"genre_scores_gemma":[0.001514264,0.9969249,0.0002923306,0.00008139209,0.00005827302,0.000006574942,0.0000717186,0.000001565385,0.001048924],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.00205946,"threshold_uncertainty_score":0.006889582,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07480224523073746,"score_gpt":0.3038535833897032,"score_spread":0.2290513381589657,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}