{"id":"W1978835916","doi":"10.1093/ps/86.7.1501","title":"Genetical Genomics: Combining Gene Expression with Marker Genotypes in Poultry","year":2007,"lang":"en","type":"article","venue":"Poultry Science","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; Biotechnology and Biological Sciences Research Council","keywords":"Expression quantitative trait loci; Quantitative trait locus; Biology; Genomics; Genetics; Functional genomics; DNA microarray; Genome; Locus (genetics); Gene; Computational biology; Comparative genomics; Genotype; Family-based QTL mapping; Gene mapping; Gene expression; Chromosome; Single-nucleotide polymorphism","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001071218,0.0004188061,0.0006491505,0.0006833447,0.0001764755,0.0005547358,0.0006702336,0.0004538318,0.000592756],"category_scores_gemma":[0.0007524434,0.000294141,0.0003816285,0.0007262024,0.0005927919,0.0005426516,0.0008496151,0.0007176505,0.0002839148],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006626649,"about_ca_system_score_gemma":0.0002712539,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003767613,"about_ca_topic_score_gemma":0.004845888,"domain_scores_codex":[0.9992705,0.000231993,0.0000302889,0.0002832871,0.0001317396,0.00005220871],"domain_scores_gemma":[0.9996369,0.0001646382,0.00006371821,0.00006114819,0.00003762591,0.00003593722],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001790169,0.00004647373,0.006102335,0.0001452363,0.00007251043,0.0001063908,0.0001108451,0.001497183,0.9570138,0.001014589,0.0001675917,0.03354399],"study_design_scores_gemma":[0.0001432987,0.001356833,0.3967293,0.0001492161,0.0004459264,0.001543205,0.0009916158,0.04342376,0.5153695,0.01131902,0.02828206,0.0002463114],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6279948,0.004953399,0.3558351,0.001230266,0.0001317922,0.0001992262,0.003311845,0.0007080502,0.005635523],"genre_scores_gemma":[0.7778998,0.002754239,0.2123002,0.0006722761,0.00005033382,0.0002041625,0.002248581,0.000245305,0.003625134],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003767613,"threshold_uncertainty_score":0.00749135,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00853415200683347,"score_gpt":0.2299250051331686,"score_spread":0.2213908531263351,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}