{"id":"W1979205785","doi":"10.1094/mpmi-22-2-0190","title":"Transcriptome Profiling in Hybrid Poplar Following Interactions with<i>Melampsora</i>Rust Fungi","year":2009,"lang":"en","type":"article","venue":"Molecular Plant-Microbe Interactions","topic":"Bioenergy crop production and management","field":"Agricultural and Biological Sciences","cited_by":86,"is_retracted":false,"has_abstract":true,"ca_institutions":"Natural Resources Canada","funders":"","keywords":"Biology; Transcriptome; Gene; Gene expression profiling; Botany; Salicaceae; Rust (programming language); Inoculation; Genome; Gene expression; Pathogen; Microarray; Genetics; Microbiology; Woody plant; Horticulture","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001329141,0.0002591528,0.0002307683,0.0001087808,0.0002505491,0.0001635081,0.0002342248,0.00004697981,0.000266406],"category_scores_gemma":[0.0000141353,0.0001341106,0.0001916649,0.000464221,0.00002768274,0.0004051066,0.00003193,0.0003957513,0.00006525563],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009698654,"about_ca_system_score_gemma":0.00001164398,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002488084,"about_ca_topic_score_gemma":0.001414761,"domain_scores_codex":[0.9984396,0.00008593559,0.0003520756,0.000522747,0.0001860192,0.0004136618],"domain_scores_gemma":[0.9995783,0.00003725952,0.00009822923,0.0001327455,0.00004799431,0.0001054545],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007916117,0.0002964277,0.000287349,0.000003771592,0.00005659346,0.0002015607,0.00007609681,0.0002868449,0.9877426,0.0007241783,0.001034488,0.009210941],"study_design_scores_gemma":[0.0007869627,0.0004102801,0.004767671,0.0002456708,0.0001074266,0.0006485367,0.001295896,0.0002482704,0.5186667,0.0002119007,0.4717676,0.0008429861],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9891946,0.0002028974,0.001217012,0.005302201,0.0007709278,0.000378178,0.00007109129,0.0001901872,0.002672894],"genre_scores_gemma":[0.9960042,0.00003457428,0.0009001206,0.001468014,0.0001187692,0.00003798315,0.0004168833,0.000003798319,0.001015667],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4707331,"threshold_uncertainty_score":0.5468872,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01053125203180684,"score_gpt":0.2162202320265384,"score_spread":0.2056889799947316,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}