{"id":"W1979618843","doi":"10.1094/phyto-04-10-0107","title":"Genetic and Morphological Evidence that <i>Phoma sclerotioides</i>, Causal Agent of Brown Root Rot of Alfalfa, Is Composed of a Species Complex","year":2010,"lang":"en","type":"article","venue":"Phytopathology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Agriculture and Agri-Food Canada; New Mexico State University; Colorado State University Extension; University of Wisconsin-Madison; Colorado State University; Pennsylvania State University; Agricultural Research Service; Montana State University; University of Wyoming; U.S. Department of Agriculture","keywords":"Biology; Root rot; Botany; Phoma; Genetic diversity; Phylogenetic tree; Clade; Horticulture; Gene; Genetics; Population","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000746732,0.0001655362,0.00009924998,0.0005156214,0.000239843,0.0001967268,0.0001174629,0.0001875315,0.001058716],"category_scores_gemma":[0.0002420726,0.000117521,0.0001367966,0.0004484477,0.0003093002,0.0001096982,0.0002122906,0.000190598,0.0002170315],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003378965,"about_ca_system_score_gemma":0.0002599298,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009255289,"about_ca_topic_score_gemma":0.0225948,"domain_scores_codex":[0.9998986,0.00001237949,0.00001023182,0.00003438393,0.00002201082,0.000022421],"domain_scores_gemma":[0.9997497,0.00004020444,0.0000924991,0.00002492278,0.00004037605,0.00005231061],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000197821,0.00003400789,0.1255047,0.00006734096,0.00003922588,0.0005736326,0.0002372242,0.0001547033,0.8679386,0.0001021926,0.00006755966,0.005083022],"study_design_scores_gemma":[0.000009824063,0.0001314124,0.9820379,0.00001000438,0.0000353601,0.001872964,0.000271653,0.0002425886,0.01431049,0.00005041164,0.001020572,0.000006806786],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984645,0.00004724402,0.0003251798,0.00001377319,0.000001230356,0.000006162677,0.0002339818,0.000006711863,0.000901312],"genre_scores_gemma":[0.9985626,0.00006031905,0.0004722636,0.00002016504,0.000001688809,0.000005729858,0.0005949389,0.000002553332,0.0002796932],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009255289,"threshold_uncertainty_score":0.01840281,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04587944825750457,"score_gpt":0.2588204949256876,"score_spread":0.2129410466681831,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}