{"id":"W1979637363","doi":"10.1371/journal.ppat.1003546","title":"Identification of New PNEPs Indicates a Substantial Non-PEXEL Exportome and Underpins Common Features in Plasmodium falciparum Protein Export","year":2013,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Malaria Research and Control","field":"Medicine","cited_by":168,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"National Heart, Lung, and Blood Institute; Medical Research Council; National Institutes of Health; Deutsche Forschungsgemeinschaft","keywords":"Signal peptide; Plasmodium falciparum; Biology; Cell biology; Translocon; Virulence; Transport protein; Computational biology; Peptide sequence; Chromosomal translocation; Malaria; Biochemistry; Gene; Immunology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000829566,0.0002064691,0.00014238,0.0001524908,0.0001075477,0.0001857041,0.00008375065,0.0001494915,0.0007827832],"category_scores_gemma":[0.0001800905,0.00008966557,0.0002471365,0.0001063549,0.0001577392,0.0003492556,0.0002431371,0.0003441937,0.000259268],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000822193,"about_ca_system_score_gemma":0.00007278212,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001102949,"about_ca_topic_score_gemma":0.0001311155,"domain_scores_codex":[0.9999551,0.000004322048,0.000005289851,0.00001430384,0.00001223645,0.000008806071],"domain_scores_gemma":[0.9998546,0.00003040666,0.00005001773,0.0000144481,0.00001736893,0.00003311306],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001286624,0.00001288489,0.002680321,0.0000415025,0.000007485286,0.0003607865,0.00003171969,0.0001019399,0.9947317,0.0001122524,0.00002612502,0.001764612],"study_design_scores_gemma":[0.00002500811,0.0007585485,0.2582846,0.0000326161,0.00006016092,0.008615986,0.0002431396,0.003323443,0.7211179,0.0004158358,0.00710029,0.000022485],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962683,0.0002677284,0.002816881,0.00002893063,0.000003875223,0.000007558849,0.0001887088,0.0000158318,0.0004021101],"genre_scores_gemma":[0.9930453,0.0003474378,0.004161753,0.00003575784,0.000009136986,0.00001124436,0.001235751,0.00001457137,0.00113905],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007827832,"threshold_uncertainty_score":0.00261867,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02059200581505525,"score_gpt":0.2693247070025066,"score_spread":0.2487327011874514,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}