{"id":"W1979959902","doi":"10.1371/journal.pntd.0001597","title":"Epidemiology and Molecular Relationships of Cryptosporidium spp. in People, Primates, and Livestock from Western Uganda","year":2012,"lang":"en","type":"article","venue":"PLoS neglected tropical diseases","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":81,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Fogarty International Center; National Institute of Allergy and Infectious Diseases; Economic and Social Research Council; Morris Animal Foundation; National Institutes of Health; National Science Foundation","keywords":"Cryptosporidium; Zoonosis; Biology; Livestock; Transmission (telecommunications); Feces; Cryptosporidium parvum; Veterinary medicine; Clade; Molecular epidemiology; Giardia; Virology; Zoology; Ecology; Microbiology; Genotype; Phylogenetics; Medicine; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00001033835,0.0001371289,0.0003755045,0.00008802771,0.00008077521,0.00000341054,0.00004922521,0.0001915494,0.0001097542],"category_scores_gemma":[0.002242459,0.0001235439,0.00003542863,0.000118832,0.0002224759,0.00008427515,0.00005582359,0.0002234143,0.00003605432],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001949655,"about_ca_system_score_gemma":0.00003294971,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001984287,"about_ca_topic_score_gemma":0.0000575555,"domain_scores_codex":[0.9987404,0.0004124745,0.0003139649,0.0001996733,0.00002227249,0.000311198],"domain_scores_gemma":[0.9976166,0.002022613,0.0000875874,0.0001483174,0.00003919871,0.00008569241],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00007744852,0.0004189045,0.9664173,0.00002839999,0.00007380701,0.000002620658,0.0001023367,0.000002598407,0.02966527,0.003057438,0.00007736509,0.00007658325],"study_design_scores_gemma":[0.0007599398,0.0001005424,0.9954962,0.00005035855,0.0001709024,0.00001135434,0.00002917484,0.00001168209,0.001831182,0.001307849,0.0001104713,0.0001203259],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9805366,0.01832461,0.0004850751,0.000144191,0.00009785482,0.0001796435,0.00013073,0.00003657601,0.00006473684],"genre_scores_gemma":[0.9989944,0.0003553256,0.0002985772,0.0001050543,0.00002804164,0.00002918609,0.0001643828,0.00001044093,0.00001459308],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02907899,"threshold_uncertainty_score":0.5037975,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02186692467480407,"score_gpt":0.2563641731449331,"score_spread":0.234497248470129,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}