{"id":"W1980385284","doi":"10.1016/j.molbiopara.2008.06.014","title":"The PCome of Caenorhabditis elegans as a prototypic model system for parasitic nematodes: Identification of phosphorylcholine-substituted proteins","year":2008,"lang":"en","type":"article","venue":"Molecular and Biochemical Parasitology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":false,"ca_institutions":"Hospital for Sick Children","funders":"Deutsche Forschungsgemeinschaft","keywords":"Biology; Caenorhabditis elegans; Phosphorylcholine; Multicellular organism; Model organism; Glycosphingolipid; Nematode; Biochemistry; Cell biology; Computational biology; Gene; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000123388,0.0003372242,0.0001411897,0.0003176023,0.0003237416,0.0002615764,0.0002681467,0.0002821279,0.0007072978],"category_scores_gemma":[0.0001509541,0.0001534675,0.0001762665,0.0001906321,0.0001908166,0.000291018,0.0002242775,0.0004678698,0.000293143],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003660267,"about_ca_system_score_gemma":0.0002740763,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002197697,"about_ca_topic_score_gemma":0.005430084,"domain_scores_codex":[0.999935,0.000008619052,0.000005835475,0.00001841544,0.00001833399,0.00001379111],"domain_scores_gemma":[0.999882,0.00003075748,0.00002637599,0.00002120474,0.00001276976,0.00002693857],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007947782,0.00001108008,0.0001728429,0.00001638776,0.000001891978,0.00003313394,0.000006764388,0.00004581926,0.9989863,0.0001739415,0.00002921445,0.0004431374],"study_design_scores_gemma":[0.0000121214,0.0001690099,0.005367571,0.000005175837,0.00001147208,0.0002822482,0.00002541666,0.001179666,0.9885412,0.00009983591,0.00429771,0.000008452299],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9911981,0.0005020003,0.005176185,0.00008950561,0.00003426913,0.00007416101,0.001422526,0.0000608686,0.001442298],"genre_scores_gemma":[0.9767303,0.0008960146,0.01475524,0.00005497351,0.000009941794,0.00009023177,0.002582841,0.00005139447,0.004829155],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002197697,"threshold_uncertainty_score":0.004369795,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01196778323416259,"score_gpt":0.2979271042983181,"score_spread":0.2859593210641556,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}