{"id":"W1980386768","doi":"10.1371/journal.pgen.1002111","title":"Trait Variation in Yeast Is Defined by Population History","year":2011,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":384,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Norges Forskningsråd; Akademie Věd České Republiky; Biotechnology and Biological Sciences Research Council; Royal Swedish Academy of Sciences; Göteborgs Universitet; Wellcome Trust","keywords":"Biology; Natural selection; Population; Evolutionary biology; Genetic variation; Genetics; Quantitative trait locus; Fixation (population genetics); Trait; Population genetics; Allele; Genetic drift; Negative selection; Gene; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008758901,0.0001208231,0.00009908421,0.0000616993,0.00002383904,0.000006959637,0.000168373,0.0001592068,0.0002627488],"category_scores_gemma":[0.00003204038,0.0001301106,0.00004266172,0.00007414534,0.00003188235,0.00000244122,0.00006492463,0.00008614851,0.00003276044],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005555742,"about_ca_system_score_gemma":0.00005561904,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008139291,"about_ca_topic_score_gemma":0.00007553295,"domain_scores_codex":[0.9990325,0.00005213488,0.0001976552,0.0002943544,0.0001893963,0.0002339606],"domain_scores_gemma":[0.9995446,0.000003657615,0.00004912654,0.0002595441,0.00006320661,0.0000799004],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004924396,0.0002255465,0.01226858,0.00001736849,0.00002064827,0.000001156867,0.0003689197,0.0000112981,0.9822922,0.00003196679,0.003870365,0.0008427593],"study_design_scores_gemma":[0.0007851175,0.0004395712,0.1032016,0.00001461116,0.00002473904,0.000003895765,0.000029589,0.002075743,0.872612,0.0003776815,0.02006015,0.0003753029],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9940227,0.001670399,0.0001735422,0.0000397654,0.0001113264,0.0001628586,0.00004733045,0.000009220898,0.003762832],"genre_scores_gemma":[0.9969269,0.0001718641,0.001348661,0.0001898329,0.00009204227,0.0000225963,0.0001563226,0.00002695107,0.001064848],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1096802,"threshold_uncertainty_score":0.5305758,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03880997686024039,"score_gpt":0.2342118985085037,"score_spread":0.1954019216482633,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}