{"id":"W1980548901","doi":"10.1089/088922201753197060","title":"Analysis of Transition from Long-Term Nonprogressive to Progressive Infection Identifies Sequences that May Attenuate HIV Type 1","year":2001,"lang":"en","type":"article","venue":"AIDS Research and Human Retroviruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"National Institute of Allergy and Infectious Diseases; Centers for Disease Control and Prevention; National Institutes of Health","keywords":"Biology; Genome; Virology; Virus; Gene; Genetics; RNA; clone (Java method); Transcription (linguistics); Promoter; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001193034,0.0001478066,0.000147282,0.0002128827,0.0001837388,0.0002434802,0.0001124438,0.0002063365,0.0007434251],"category_scores_gemma":[0.0004439451,0.00009363431,0.0001572412,0.0001104824,0.0001177664,0.0001146418,0.0001378644,0.0003321331,0.0001284943],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001077008,"about_ca_system_score_gemma":0.00009783521,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005028023,"about_ca_topic_score_gemma":0.0006137424,"domain_scores_codex":[0.9999264,0.00001300994,0.000004517216,0.00001533333,0.00001486974,0.00002583003],"domain_scores_gemma":[0.9998289,0.00004127505,0.0000426015,0.00001584142,0.00002390726,0.00004745548],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007751114,0.0002049552,0.1242422,0.00003785509,0.00002371895,0.001487423,0.0004383843,0.0001508601,0.8624425,0.0001304328,0.00005734562,0.01000928],"study_design_scores_gemma":[0.00002031862,0.002862895,0.9225737,0.0000117629,0.0000514944,0.004842058,0.0004222816,0.001081327,0.06702242,0.0001161874,0.0009836046,0.00001187582],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9996277,0.0000868866,0.0001163123,0.000004416249,6.132451e-7,0.00000600102,0.00002185048,0.000002602689,0.0001337588],"genre_scores_gemma":[0.9991648,0.00007597845,0.000245602,0.00001479516,0.000001673613,0.00001179791,0.0001308342,0.000002202057,0.0003522704],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007434251,"threshold_uncertainty_score":0.002487004,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08324221783595419,"score_gpt":0.3904069580868976,"score_spread":0.3071647402509434,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}