{"id":"W1980566362","doi":"10.1016/j.tvjl.2015.03.018","title":"Characterization and comparison of the bacterial microbiota in different gastrointestinal tract compartments in horses","year":2015,"lang":"en","type":"article","venue":"The Veterinary Journal","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":223,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; Microbiology; Feces; Cecum; Clostridium; Incertae sedis; Firmicutes; Population; Proteobacteria; Ileum; Gastrointestinal tract; Bacteria; Zoology; Genus; Ecology; 16S ribosomal RNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002053072,0.00009481672,0.0001483543,0.00003390491,0.00005022756,0.00002204903,0.0001551185,0.00003279435,0.000005708765],"category_scores_gemma":[0.00001653585,0.00005442869,0.0000307104,0.00004441761,0.00007164774,0.000005305921,0.0001000566,0.0001593798,5.494289e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002449899,"about_ca_system_score_gemma":0.00005363472,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001040174,"about_ca_topic_score_gemma":0.00002141894,"domain_scores_codex":[0.9992189,0.0002033678,0.0002734301,0.00009381321,0.00005890034,0.0001515205],"domain_scores_gemma":[0.9996442,0.000007141437,0.0001592163,0.0001166151,0.00002495319,0.00004784187],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002811708,0.0001434387,0.1460436,0.000008274216,0.00000270522,0.00000301492,0.0002324454,0.000005825869,0.8529477,9.89945e-7,0.00007473519,0.0002560893],"study_design_scores_gemma":[0.001030736,0.0008983367,0.970072,0.0001015364,0.000005101546,0.001272663,0.0001628241,0.00003396233,0.0252256,0.000006080035,0.001127615,0.00006358912],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992256,0.00008849295,0.00003760885,0.0003095197,0.0001898171,0.0001241856,0.00001316453,9.964566e-7,0.00001063016],"genre_scores_gemma":[0.9997012,0.00003183867,0.00006392416,0.00003731716,0.0001118636,0.000001588726,0.00002425855,0.000006454181,0.00002156511],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8277221,"threshold_uncertainty_score":0.2219537,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04962263006307487,"score_gpt":0.3100700500355131,"score_spread":0.2604474199724383,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}