{"id":"W1980827162","doi":"10.1007/s11262-014-1156-7","title":"Comparative analysis of the complete genome sequences of Kenyan African swine fever virus isolates within p72 genotypes IX and X","year":2015,"lang":"en","type":"article","venue":"Virus Genes","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":60,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada; Commonwealth Scientific and Industrial Research Organisation; Eli Lilly and Company","keywords":"Biology; Genome; ORFS; Genetics; Genotype; African swine fever virus; Gene; Virology; Whole genome sequencing; Open reading frame; Peptide sequence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002947974,0.0001238971,0.0004286271,0.00003409649,0.00009614271,0.00001296503,0.0002636371,0.00004269204,0.0001560615],"category_scores_gemma":[0.0000272374,0.0000418053,0.0001188839,0.00063916,0.0003057998,0.00006896237,0.0001577165,0.0000408885,0.0000069346],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009045654,"about_ca_system_score_gemma":0.000007769602,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003726322,"about_ca_topic_score_gemma":0.006291944,"domain_scores_codex":[0.9990283,0.0001875635,0.0002881662,0.0002131128,0.0001277217,0.0001551188],"domain_scores_gemma":[0.9993995,0.0001260515,0.0002424594,0.00007277702,0.00008285198,0.00007638866],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001103196,0.00006478967,0.08416004,0.000008935295,0.0004983541,7.003198e-7,0.00100385,0.0009622692,0.9114131,0.0006013536,0.00008130283,0.001095028],"study_design_scores_gemma":[0.0001061479,0.0002288819,0.983319,0.000004830033,0.0004721671,4.053401e-7,0.001325896,0.001678498,0.005396118,0.0008859638,0.006428689,0.0001534301],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965228,0.002270229,0.000006880036,0.0003244041,0.00003494762,0.0001190722,0.0001997498,0.00001309522,0.0005088393],"genre_scores_gemma":[0.9994435,0.0001548545,0.0001066547,0.0001508273,0.00004526314,0.000004692701,0.00002753351,5.778032e-7,0.00006604024],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9060169,"threshold_uncertainty_score":0.5633109,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09969782286109191,"score_gpt":0.2751787914964813,"score_spread":0.1754809686353894,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}