{"id":"W1980848179","doi":"10.1016/j.gene.2005.09.003","title":"Transcription of two human genes from a bidirectional endogenous retrovirus promoter","year":2005,"lang":"en","type":"article","venue":"Gene","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":98,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Victoria; University of British Columbia; BC Cancer Agency","funders":"Canadian Institutes of Health Research; BC Cancer Foundation; University of British Columbia","keywords":"Biology; Promoter; Endogenous retrovirus; Long terminal repeat; Gene; Genetics; Transcription (linguistics); Retrovirus; Human genome; Genome; Transcription factor; Regulation of gene expression; Molecular biology; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00004828963,0.00006979789,0.00009058899,0.000007310491,0.000121912,0.00001247518,0.00008858316,0.00004076974,0.001627042],"category_scores_gemma":[0.000002765507,0.00002988886,0.00007160984,0.0001072556,0.00002192722,0.00003965278,0.0000133073,0.0000346007,0.00004114483],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001461655,"about_ca_system_score_gemma":0.000005068051,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000949285,"about_ca_topic_score_gemma":0.002157951,"domain_scores_codex":[0.9994161,0.00002912107,0.000156034,0.000160229,0.0001252425,0.0001132488],"domain_scores_gemma":[0.9998205,0.0000179145,0.00004652346,0.00003813286,0.00003708514,0.00003981928],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000005138507,0.00008109128,0.001964002,6.291495e-7,0.00001152019,5.031039e-7,0.00008256092,0.00001735851,0.9414907,0.00006315348,0.00001939566,0.05626393],"study_design_scores_gemma":[0.0002192189,0.000145971,0.08751205,0.000003953402,0.000020353,0.000009206375,0.00001417545,0.00004951527,0.8972078,0.001266737,0.01344835,0.0001026658],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980832,0.0004470708,0.0000126388,0.0004442503,0.00008054896,0.00009564347,0.0001691521,0.00003189164,0.0006355731],"genre_scores_gemma":[0.997782,0.00002663875,0.0009582735,0.00006448144,0.0008079846,0.00001063548,0.0001470638,6.415442e-7,0.0002023075],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08554805,"threshold_uncertainty_score":0.9992856,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04321889093267692,"score_gpt":0.2330762219630766,"score_spread":0.1898573310303996,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}