{"id":"W1981015160","doi":"10.1038/sj.gene.6364344","title":"Complexity in the host response to Salmonella Typhimurium infection in AcB and BcA recombinant congenic strains","year":2006,"lang":"en","type":"article","venue":"Genes and Immunity","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":30,"is_retracted":false,"has_abstract":false,"ca_institutions":"Memorial University of Newfoundland; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Congenic; Salmonella; Biology; Salmonella infection; Genotype; Genetics; Allele; Phenotype; Typhoid fever; Microbiology; Recombinant DNA; Gene; Quantitative trait locus; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001148235,0.0001007108,0.00016839,0.00002086103,0.000154833,0.00003372706,0.0001044674,0.00008058461,0.0000243043],"category_scores_gemma":[0.00005691859,0.00003893419,0.00002646645,0.0002428762,0.00009503751,0.00004372339,0.00007646182,0.0001373465,0.000004310223],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001553106,"about_ca_system_score_gemma":0.000004673921,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.01787348,"about_ca_topic_score_gemma":0.0291157,"domain_scores_codex":[0.9986132,0.0007634085,0.000194154,0.0001703254,0.00004756391,0.0002113084],"domain_scores_gemma":[0.9995154,0.0003281508,0.00003916014,0.00006633873,0.00001730082,0.00003368391],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003420541,0.0001343608,0.7615314,0.000004710436,0.000003361774,0.000004961906,0.000285536,0.000004077286,0.2234454,0.0002743798,0.0001007835,0.0138689],"study_design_scores_gemma":[0.0001682289,0.0003068132,0.9939232,0.000007453009,0.000002807439,0.00001832316,0.0003419782,0.00002325883,0.0001914593,0.001397484,0.003522283,0.0000967168],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.996859,0.0005244922,9.141834e-7,0.002156014,0.00007665132,0.0001911245,0.00001163915,0.00001094858,0.0001692547],"genre_scores_gemma":[0.9991024,0.0004524578,0.0000117156,0.0003087443,0.00004313047,0.00001139464,0.0000202361,6.150244e-7,0.0000493593],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2323918,"threshold_uncertainty_score":0.9886666,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0535972287912035,"score_gpt":0.2652124496168032,"score_spread":0.2116152208255997,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}