{"id":"W1981050837","doi":"10.1094/mpmi.2004.17.10.1051","title":"Patterns of Gene Expression Upon Infection of Soybean Plants by<i>Phytophthora sojae</i>","year":2004,"lang":"en","type":"article","venue":"Molecular Plant-Microbe Interactions","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":220,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Phytophthora sojae; Biology; Pathogen; Gene; Gene expression; Microarray; Microarray analysis techniques; Microbiology; Complementary DNA; DNA microarray; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006834892,0.0001541208,0.0002151643,0.00003153997,0.0001040943,0.00001880466,0.0001461951,0.00009118511,0.00009314711],"category_scores_gemma":[0.00001211287,0.00007508967,0.0001401811,0.0001184252,0.00001984615,0.0001050047,0.00003904968,0.0001412864,0.00001032571],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002947164,"about_ca_system_score_gemma":0.000009595768,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007128467,"about_ca_topic_score_gemma":0.0008062618,"domain_scores_codex":[0.9990172,0.00005521404,0.0003219397,0.0002464137,0.0001578384,0.0002013987],"domain_scores_gemma":[0.9995129,0.00004130587,0.0002403137,0.00008653961,0.00005359285,0.00006536947],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005494552,0.00022287,0.001398798,0.00001826063,0.00001727976,0.00002568392,0.0000240373,0.00007381044,0.997346,0.00003205583,0.0003322157,0.000453972],"study_design_scores_gemma":[0.0001731024,0.00009933749,0.009176092,0.0002264408,0.00001523504,0.0001329689,0.00004695349,0.000005653538,0.9872637,0.00006144692,0.002653635,0.0001454725],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9946367,0.0001554623,0.001575991,0.0001022902,0.0002296958,0.0001383747,0.002920321,0.00003176845,0.000209397],"genre_scores_gemma":[0.9986061,0.0001145015,0.0002677128,0.00005425344,0.00004494777,0.000008333564,0.0008298765,0.00000221566,0.00007203169],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01008241,"threshold_uncertainty_score":0.3062068,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009755713450422886,"score_gpt":0.2142839012477499,"score_spread":0.204528187797327,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}