{"id":"W1981425062","doi":"10.1021/bi015785f","title":"Hemin-Stimulated Docking of Cytochrome <i>c</i> to a Hemin−DNA Aptamer Complex","year":2002,"lang":"en","type":"article","venue":"Biochemistry","topic":"DNA and Nucleic Acid Chemistry","field":"Biochemistry, Genetics and Molecular Biology","cited_by":76,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Hemin; Heme; Chemistry; Aptamer; Ternary complex; Guanine; DNA; Cytochrome; Cytochrome c; Hemeprotein; Stereochemistry; Biochemistry; Biology; Nucleotide; Enzyme; Molecular biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00009283303,0.0003525055,0.0003422265,0.00003559376,0.00007944417,0.00002363537,0.000520256,0.0003534521,0.0006301615],"category_scores_gemma":[0.0001340327,0.0003782815,0.0002034285,0.0002323392,0.0001692177,0.000004231886,0.0002935716,0.0001417274,0.00006627895],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003624339,"about_ca_system_score_gemma":0.00003584551,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006256033,"about_ca_topic_score_gemma":5.847943e-7,"domain_scores_codex":[0.9981169,0.00001272862,0.0004476183,0.0006621596,0.0002841677,0.0004764739],"domain_scores_gemma":[0.9985161,0.00001684693,0.0001688605,0.0008632157,0.0001456926,0.0002892795],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005590912,0.0001480888,0.0003714579,0.0001132246,0.00007295001,0.000009681867,0.00004510196,0.00002345358,0.9624878,0.000002168349,0.0357353,0.0009348224],"study_design_scores_gemma":[0.0006402723,0.00009557509,0.0001845093,0.00006175745,0.00003091079,0.00006243349,0.00006612555,0.0001740281,0.9725708,0.000005960271,0.02567308,0.0004345751],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9796309,0.0005319749,0.00009899929,0.0001838548,0.00006390384,0.0001480613,0.00008932599,0.00004735127,0.01920556],"genre_scores_gemma":[0.9943095,0.00004812639,0.001038382,0.0005297494,0.000354818,0.00002213498,0.0002126547,0.00005606118,0.003428602],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01577696,"threshold_uncertainty_score":0.9998669,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01805208617444359,"score_gpt":0.2375732431201058,"score_spread":0.2195211569456622,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}