{"id":"W1981516407","doi":"10.1038/nature13415","title":"Comparative analysis of metazoan chromatin organization","year":2014,"lang":"en","type":"article","venue":"Nature","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":449,"is_retracted":false,"has_abstract":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"National Institute of General Medical Sciences; National Human Genome Research Institute; National Natural Science Foundation of China; National Institute of Biomedical Imaging and Bioengineering; Wellcome Trust; Howard Hughes Medical Institute; National Cancer Institute; National Institutes of Health; National Science Foundation","keywords":"Chromatin; Biology; ChIA-PET; Scaffold/matrix attachment region; Heterochromatin; Genetics; Genome; Bivalent chromatin; Nucleosome; Genomic organization; Histone; Caenorhabditis elegans; Computational biology; Chromatin remodeling; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000808552,0.00006960209,0.0001719846,0.00005707007,0.00002646019,0.000007603954,0.0001166587,0.0003804617,0.00003180554],"category_scores_gemma":[0.00005423432,0.00006276849,0.00006284915,0.0003750164,0.00002184913,0.000001033154,0.00003795034,0.0001481433,0.000002362958],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005234781,"about_ca_system_score_gemma":0.00001517427,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003195631,"about_ca_topic_score_gemma":0.00004062106,"domain_scores_codex":[0.9995768,0.00003043599,0.0001159732,0.0001372665,0.00007244507,0.0000670919],"domain_scores_gemma":[0.9995285,0.000007288056,0.00009409435,0.0002080285,0.0001390946,0.00002304841],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000007056398,0.00004489205,0.008283713,0.00001249379,0.0008551591,1.066765e-7,0.0001397415,0.002939248,0.9842883,0.002065521,0.00113736,0.0002264619],"study_design_scores_gemma":[0.0005346898,0.0002039664,0.2178427,0.000007265423,0.001043461,0.000002677365,0.0001498584,0.02985501,0.7365423,0.0002039731,0.013286,0.0003280731],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9951603,0.000174448,0.002808452,0.00004664798,0.00004503057,0.00004282341,0.00002288624,0.000004881373,0.001694503],"genre_scores_gemma":[0.9972768,0.00001374851,0.001766125,0.0001570451,0.00004108545,9.50012e-7,0.0006219217,0.000005960886,0.0001163823],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2477459,"threshold_uncertainty_score":0.2934469,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003351081159782391,"score_gpt":0.23540096583637,"score_spread":0.2320498846765876,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}