{"id":"W1981741911","doi":"10.3852/08-071","title":"<i>Pleospora</i>species with<i>Stemphylium</i>anamorphs: a four locus phylogeny resolves new lineages yet does not distinguish among species in the<i>Pleospora herbarum</i>clade","year":2009,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":71,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Dothideomycetes; Clade; Species complex; Intergenic region; Phylogenetic tree; Phylogenetics; Botany; Genetics; Zoology; Gene; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002296282,0.000267271,0.0001948148,0.0005655958,0.0003808874,0.000566027,0.0002212195,0.0003344877,0.001104534],"category_scores_gemma":[0.0004116787,0.0001388773,0.0002150261,0.0005796741,0.0002255589,0.0003023441,0.0004040035,0.0004197043,0.0004672278],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001275684,"about_ca_system_score_gemma":0.0001504875,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005420519,"about_ca_topic_score_gemma":0.001004211,"domain_scores_codex":[0.9998004,0.00003561167,0.00001762912,0.00007543146,0.00003267118,0.00003832039],"domain_scores_gemma":[0.9995009,0.0001105414,0.0001745779,0.00008201761,0.0000517103,0.00008030938],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003741629,0.00009124132,0.2876748,0.0001657275,0.00008262548,0.0003291696,0.001100278,0.0002380782,0.6884933,0.000234783,0.0001962315,0.02101961],"study_design_scores_gemma":[0.00001002319,0.0001768296,0.9812548,0.00003615398,0.00005506775,0.001340841,0.0005437359,0.0008749681,0.01130295,0.0001534982,0.004239719,0.00001144226],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962968,0.0002222045,0.00167834,0.00004051171,0.000004794919,0.00002385802,0.0004459447,0.00002389685,0.001263711],"genre_scores_gemma":[0.9951993,0.0001417794,0.002688164,0.0000488885,0.00001025783,0.00001973624,0.001565736,0.00001237598,0.0003138647],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001104534,"threshold_uncertainty_score":0.003695011,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0142639060840202,"score_gpt":0.212082338871083,"score_spread":0.1978184327870628,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}