{"id":"W1981762250","doi":"10.1097/mog.0b013e32834dda51","title":"Recent advances in Helicobacter pylori pathogenesis","year":2011,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; Hospital for Sick Children; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research","keywords":"CagA; Disease; Helicobacter pylori; Pathogenesis; Immunology; Mechanism (biology); Microbiome; Medicine; Biology; Inflammatory bowel disease; Bioinformatics; Gene; Genetics; Virulence; Pathology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005943842,0.001237744,0.004380672,0.001880597,0.00005378482,0.00001574626,0.0005574089,0.0007609747,0.0002134555],"category_scores_gemma":[0.0002055474,0.001075857,0.0006155557,0.0008328115,0.0003686518,0.0002262404,0.0004966531,0.00227276,0.0002792356],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006905941,"about_ca_system_score_gemma":0.0002176122,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005801473,"about_ca_topic_score_gemma":0.00008962608,"domain_scores_codex":[0.9928794,0.001004462,0.00251589,0.001585406,0.0002879166,0.001726961],"domain_scores_gemma":[0.9975705,0.0001216923,0.0008237053,0.0009576418,0.0001899493,0.0003365079],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0005137376,0.0008324088,0.1325193,0.00934511,0.0002090649,0.00003795324,0.0001292642,5.576999e-7,1.893374e-7,0.00001726887,0.000672124,0.8557231],"study_design_scores_gemma":[0.002638896,0.001211709,0.01731514,0.02049285,0.0003712543,0.0004623919,0.00002193633,0.00000197746,8.649864e-8,0.00001445905,0.9571368,0.0003325316],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0006034914,0.9844028,0.00004261313,0.0002871402,0.01244752,0.001887116,0.000118625,0.0001039829,0.000106649],"genre_scores_gemma":[0.00002055299,0.9968005,0.0001252443,0.0001570545,0.0008388664,0.001140963,0.0007520994,0.0001442319,0.00002051811],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9564646,"threshold_uncertainty_score":0.9991692,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08959892380025195,"score_gpt":0.3694267484091646,"score_spread":0.2798278246089126,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}