{"id":"W1982152162","doi":"10.1021/jf034744i","title":"Pattern Similarity Analysis of Amino Acid Sequences for Peptide Emulsification","year":2004,"lang":"en","type":"article","venue":"Journal of Agricultural and Food Chemistry","topic":"Machine Learning in Bioinformatics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"Toronto Metropolitan University; University of British Columbia; Dalhousie University","funders":"Morinaga Milk Industry","keywords":"Peptide; Amino acid; Chemistry; Homology (biology); Residue (chemistry); Proline; Polar; Structural similarity; Biological system; Chromatography; Biochemistry; Biology; Physics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001066115,0.00009492508,0.0001911015,0.00002093193,0.00003995686,0.00001722752,0.0001254901,0.00009885077,0.000004172048],"category_scores_gemma":[0.00007410965,0.00005994173,0.0001806996,0.0001016942,0.00004481295,0.000009087306,0.00002672953,0.00009253305,8.240531e-8],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000138239,"about_ca_system_score_gemma":0.00002283839,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003384168,"about_ca_topic_score_gemma":0.000006926178,"domain_scores_codex":[0.9993647,0.000006821359,0.00033729,0.0000845629,0.0001157232,0.0000908475],"domain_scores_gemma":[0.9991693,0.000009227216,0.0004592768,0.00008131634,0.0002248793,0.00005598185],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001879313,0.00003943936,0.005272054,0.0001119771,0.0005496827,1.827406e-7,0.0001464473,0.001428927,0.9917042,0.000004313903,0.0001147608,0.0006092265],"study_design_scores_gemma":[0.0005020809,0.0003973038,0.1093303,0.00002806223,0.0004292239,0.00006028821,0.000495647,0.00005461945,0.888253,0.00003807176,0.0002868368,0.0001246365],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974697,0.0003308113,0.001722636,0.0002469718,0.0000219898,0.00004051617,0.00003744693,0.000002065574,0.0001278653],"genre_scores_gemma":[0.9978524,0.0001073056,0.00172006,0.00003528393,0.0001265857,0.000001570041,0.0001108933,0.000002658019,0.00004325964],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1040582,"threshold_uncertainty_score":0.2444353,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008901864171211707,"score_gpt":0.2349119577001838,"score_spread":0.2260100935289721,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}