{"id":"W1982270218","doi":"10.1021/bi701956x","title":"Polyisoprenol Specificity in the <i>Campylobacter jejuni</i> N-Linked Glycosylation Pathway","year":2007,"lang":"en","type":"article","venue":"Biochemistry","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":47,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute for Biological Sciences","funders":"National Institute of General Medical Sciences","keywords":"Campylobacter jejuni; Glycosylation; Chemistry; Asparagine; Biochemistry; Enzyme; Substrate (aquarium); Degree of unsaturation; Membrane; Biophysics; Stereochemistry; Biology; Bacteria; Organic chemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008503071,0.0001819985,0.0001121972,0.00005577607,0.0001000803,0.00005374002,0.0004086564,0.0002775112,0.0001132938],"category_scores_gemma":[0.0001679137,0.0001468392,0.00009310928,0.0002751017,0.00009777939,0.000005501379,0.00009347025,0.0002510547,0.00004792077],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004184092,"about_ca_system_score_gemma":0.00009199649,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004926553,"about_ca_topic_score_gemma":0.0001120386,"domain_scores_codex":[0.9984678,0.00006041337,0.000304421,0.0003981511,0.0003464801,0.0004227207],"domain_scores_gemma":[0.9991013,0.00003258555,0.00007782481,0.000602014,0.00009191771,0.0000943015],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001892578,0.0001618211,0.004281306,0.00001896761,0.00000960889,0.00001798063,0.00005667416,0.000004848407,0.988279,0.00008041452,0.001219079,0.005680973],"study_design_scores_gemma":[0.0006613718,0.00008365962,0.01686454,0.00001255819,0.000002879591,0.00003176797,0.0001849576,0.00003489677,0.9210735,0.00006684268,0.06076982,0.0002132398],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9765487,0.0003326871,0.001084111,0.0003417894,0.00008023688,0.0002947629,0.0000196437,0.00001783552,0.02128018],"genre_scores_gemma":[0.9969888,0.00003802811,0.000275493,0.0004116173,0.0004822258,0.00002069665,0.0002684777,0.00001858625,0.00149612],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0672056,"threshold_uncertainty_score":0.5987929,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01366424325160432,"score_gpt":0.2704319639490857,"score_spread":0.2567677206974814,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}