{"id":"W1982690686","doi":"10.1007/s00439-011-0973-1","title":"Potential novel candidate polymorphisms identified in genome-wide association study for breast cancer susceptibility","year":2011,"lang":"en","type":"article","venue":"Human Genetics","topic":"BRCA gene mutations in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":51,"is_retracted":false,"has_abstract":true,"ca_institutions":"Alberta Health Services; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Partenariat Canadien Contre Le Cancer; Cure Brain Cancer Foundation; Alberta Cancer Foundation; Cancer Research Institute","keywords":"Genome-wide association study; Single-nucleotide polymorphism; Breast cancer; Biology; Genetic association; Genotyping; Genetics; Candidate gene; SNP; Locus (genetics); Allele; Oncology; Cancer; Genotype; Gene; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001238819,0.0005327198,0.000790671,0.001176001,0.000628389,0.0006974339,0.0006538374,0.0009301468,0.001486307],"category_scores_gemma":[0.002740248,0.0002583619,0.0009632165,0.002069104,0.0004119427,0.0001680107,0.0003022674,0.0006546723,0.0002150777],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004602041,"about_ca_system_score_gemma":0.001074592,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01613031,"about_ca_topic_score_gemma":0.02660709,"domain_scores_codex":[0.9988193,0.0002628247,0.0001282135,0.000354767,0.0002724628,0.0001624627],"domain_scores_gemma":[0.9990667,0.0003702277,0.0002208352,0.00008873535,0.0001131074,0.000140504],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002314724,0.0002270214,0.9406658,0.0001448478,0.001323322,0.008736439,0.0006317563,0.0005715155,0.03257091,0.0004283757,0.00081339,0.01157174],"study_design_scores_gemma":[0.0001915955,0.0002124809,0.9909387,0.00001959976,0.0007522335,0.002560321,0.0001514739,0.001314519,0.001984648,0.000356669,0.001493348,0.00002449351],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961244,0.001124485,0.001347935,0.0001843264,0.00005269228,0.00005068136,0.0005362957,0.00004146211,0.0005375591],"genre_scores_gemma":[0.9974321,0.0001714415,0.001437224,0.00008824898,0.00002579045,0.00002847271,0.0003757656,0.000009730175,0.0004313017],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01613031,"threshold_uncertainty_score":0.0320729,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02560027928852334,"score_gpt":0.2889138768559233,"score_spread":0.2633135975674,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}