{"id":"W1983099741","doi":"10.1074/jbc.m406808200","title":"Revisiting the Regiospecificity of Burkholderia xenovorans LB400 Biphenyl Dioxygenase toward 2,2′-Dichlorobiphenyl and 2,3,2′,3′-Tetrachlorobiphenyl","year":2004,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Metabolite; Chemistry; Dioxygenase; Biphenyl; Stereochemistry; Oxygenase; Burkholderia; Biochemistry; Enzyme; Organic chemistry; Bacteria; Biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002151333,0.0003457469,0.0002124911,0.0001345807,0.000118872,0.0003805834,0.0002485965,0.0002686278,0.0004090742],"category_scores_gemma":[0.0002907055,0.0001737723,0.0002021173,0.0002320198,0.0002240839,0.0003122765,0.0002667524,0.0003919364,0.0002847462],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003432853,"about_ca_system_score_gemma":0.0002865332,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002438091,"about_ca_topic_score_gemma":0.002162689,"domain_scores_codex":[0.9997539,0.00004757907,0.00001886384,0.00005106096,0.00008021825,0.00004840181],"domain_scores_gemma":[0.9998747,0.00002735734,0.00003229591,0.00002034938,0.00003022337,0.00001499594],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004366587,0.00001647052,0.0005351549,0.00001383684,0.000002868875,0.00003949091,0.00001632748,0.0000659689,0.9982682,0.00003948748,0.000009760843,0.0009487277],"study_design_scores_gemma":[0.000003834544,0.0001138042,0.00491357,0.000001937934,0.000005856229,0.0001494356,0.00005720774,0.0005002395,0.993383,0.0000456099,0.0008202039,0.000005320357],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9958373,0.0006396042,0.0022006,0.000112838,0.000009405643,0.00001606965,0.000277223,0.0000398814,0.000867068],"genre_scores_gemma":[0.9970775,0.0002944252,0.001392681,0.00003656084,0.000003730337,0.00001323752,0.0005700784,0.00001747823,0.0005943722],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002438091,"threshold_uncertainty_score":0.004847765,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02536515702214887,"score_gpt":0.2265931947946652,"score_spread":0.2012280377725164,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}