{"id":"W1983525091","doi":"10.1186/s13058-015-0570-7","title":"Common germline polymorphisms associated with breast cancer-specific survival","year":2015,"lang":"en","type":"review","venue":"Breast Cancer Research","topic":"BRCA gene mutations in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada Research Chairs; University Health Network; Lunenfeld-Tanenbaum Research Institute; University of Toronto","funders":"National Cancer Institute; Medical Research Council; Faculty of Health and Medical Sciences, University of Western Australia; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Karolinska Institutet; Herlev Hospital; Gentofte Hospital; Agency for Science, Technology and Research; Fonds Wetenschappelijk Onderzoek; Cancer Institute NSW; University of Southampton; National Institute for Health and Care Research; National Health and Medical Research Council; Cancer Research UK; National Breast Cancer Foundation; Helsingin Yliopisto; Francis Crick Institute; Breast Cancer Campaign; Det Sundhedsvidenskabelige Fakultet, Københavns Universitet; Helsingin ja Uudenmaan Sairaanhoitopiiri; L'Oreal USA; European Commission; Breast Cancer Research Foundation","keywords":"Surgical oncology; Breast cancer; Germline; Medicine; Oncology; Internal medicine; Cancer; Bioinformatics; Biology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001823989,0.0007694459,0.001586417,0.0003899654,0.0003377107,0.0001772293,0.001350475,0.0008571482,0.0006963686],"category_scores_gemma":[0.00003584003,0.0006240919,0.0003546651,0.001564676,0.0007066971,0.00001350296,0.0006151389,0.001308022,0.00008423664],"about_ca_system_candidate":true,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00282158,"about_ca_system_score_gemma":0.008573358,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001880709,"about_ca_topic_score_gemma":0.00316731,"domain_scores_codex":[0.9937487,0.001142961,0.0007151221,0.001437936,0.001648926,0.001306376],"domain_scores_gemma":[0.9957365,0.0001048095,0.0004200032,0.00141173,0.001849763,0.0004771482],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003428095,0.0002213657,0.0003602689,0.001090761,0.001071447,0.0000464941,0.00004016496,0.00003950996,0.0001278493,0.00003196581,0.05371737,0.94291],"study_design_scores_gemma":[0.0009075947,0.0001321361,0.0008923259,0.004343016,0.00024693,0.0003830342,0.0000384876,0.000004044358,0.00003993336,0.00001447171,0.9921865,0.0008114622],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0004903275,0.9853614,0.00001379365,0.0007324135,0.0007047719,0.001242057,0.01048609,0.00004939171,0.0009197674],"genre_scores_gemma":[0.001623203,0.9871557,0.00002888205,0.0000471792,0.002800655,0.001927954,0.002269194,0.0003208625,0.003826347],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9420985,"threshold_uncertainty_score":0.999621,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1173455592528162,"score_gpt":0.426488160963252,"score_spread":0.3091426017104358,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}