{"id":"W1983918144","doi":"10.1128/aem.71.11.7613-7617.2005","title":"Bacteriocin (Mutacin) Production by <i>Streptococcus mutans</i> Genome Sequence Reference Strain UA159: Elucidation of the Antimicrobial Repertoire by Genetic Dissection","year":2005,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Bacterial Identification and Susceptibility Testing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":84,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Health Research Council of New Zealand; Otago Medical Research Foundation; University of Toronto; University of Otago","keywords":"Bacteriocin; Streptococcus mutans; Biology; Strain (injury); Whole genome sequencing; Genetics; Repertoire; Antimicrobial; Microbiology; Genome; Computational biology; Sequence (biology); Gene; Bacteria; Anatomy","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009402372,0.00015057,0.0001252484,0.00001343393,0.0001365696,0.00001566836,0.0001295742,0.0001614097,0.00004302837],"category_scores_gemma":[0.00001172682,0.0001308589,0.00003141654,0.00004680346,0.0002886791,0.000008737454,0.00008757815,0.0000897428,0.000006214401],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003846343,"about_ca_system_score_gemma":0.00001465182,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001171327,"about_ca_topic_score_gemma":0.00002173348,"domain_scores_codex":[0.9989789,0.00006134454,0.0002838347,0.0004748186,0.00003278343,0.0001683482],"domain_scores_gemma":[0.9995066,0.000004913457,0.0001602204,0.0002850653,0.00000890402,0.00003431239],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002251127,0.00006848852,0.00168866,0.00001086459,0.00001238291,5.129086e-8,0.00005534444,0.00001399657,0.9924821,0.0000023373,0.0004176769,0.005225642],"study_design_scores_gemma":[0.0002131504,0.00005346881,0.01281046,0.000005154762,0.00001351372,0.0000361948,0.0000711876,0.000003973509,0.9673688,0.000003419246,0.01927119,0.0001494937],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985008,0.0001046525,0.00008853587,0.0002064465,0.0001043333,0.0003312752,0.0006084299,0.000009582615,0.00004591694],"genre_scores_gemma":[0.9961206,0.0001937102,0.0001309557,0.0001688182,0.00007893091,0.00002119503,0.00291607,0.00001334757,0.0003564025],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02511325,"threshold_uncertainty_score":0.5336272,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005325087641576195,"score_gpt":0.1869164067004393,"score_spread":0.1815913190588631,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}