{"id":"W1984331348","doi":"10.1371/journal.pgen.1003624","title":"Gene Set Signature of Reversal Reaction Type I in Leprosy Patients","year":2013,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Leprosy Research and Treatment","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; McGill University; Université de Montréal; McGill University Health Centre","funders":"CHIST-ERA; Canadian Institutes of Health Research; Institut National de la Santé et de la Recherche Médicale; Agence Nationale de la Recherche; Order of Malta; Government of Canada","keywords":"Biology; Innate immune system; Leprosy; Transcriptome; Mycobacterium leprae; Gene; Immunology; Genetics; Immune system; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001192368,0.0002085536,0.0004152677,0.0006205312,0.0002349818,0.0003606485,0.0001362938,0.0002803529,0.001589969],"category_scores_gemma":[0.0003919314,0.00009932079,0.0002884769,0.0008020878,0.0001914386,0.0000842411,0.0001845474,0.0002636729,0.0002724085],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001517681,"about_ca_system_score_gemma":0.0001381878,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004687676,"about_ca_topic_score_gemma":0.000461374,"domain_scores_codex":[0.9998023,0.00002802045,0.00001880157,0.00007262701,0.00003796793,0.00004026109],"domain_scores_gemma":[0.9997099,0.00006597371,0.0001382178,0.00001591299,0.00002831279,0.00004160354],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00308808,0.0001447818,0.5937631,0.0003011044,0.0001862881,0.002558821,0.0004498479,0.0004233439,0.3813241,0.000221831,0.0007322078,0.01680655],"study_design_scores_gemma":[0.00001966928,0.0003055672,0.9867882,0.00001596075,0.00007142935,0.00284186,0.0002411569,0.0003544257,0.008224429,0.0001313926,0.0009945753,0.00001137676],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975613,0.0003938915,0.0001984205,0.00004152378,0.000006879969,0.000009872409,0.001478759,0.00001008169,0.0002991464],"genre_scores_gemma":[0.996417,0.0002274328,0.0008148436,0.00006117776,0.00001082542,0.00002734182,0.001958118,0.000007819634,0.0004753949],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001589969,"threshold_uncertainty_score":0.005318999,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02797501724465079,"score_gpt":0.2784829746101685,"score_spread":0.2505079573655177,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}