{"id":"W1984331348","doi":"10.1371/journal.pgen.1003624","title":"Gene Set Signature of Reversal Reaction Type I in Leprosy Patients","year":2013,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Leprosy Research and Treatment","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; McGill University; Université de Montréal; McGill University Health Centre","funders":"CHIST-ERA; Canadian Institutes of Health Research; Institut National de la Santé et de la Recherche Médicale; Agence Nationale de la Recherche; Order of Malta; Government of Canada","keywords":"Biology; Innate immune system; Leprosy; Transcriptome; Mycobacterium leprae; Gene; Immunology; Genetics; Immune system; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003434618,0.0000734928,0.000135801,0.00006788646,0.00001174605,0.000004738346,0.00004001491,0.00008009266,0.00006791304],"category_scores_gemma":[0.0000691604,0.00005811714,0.00002473542,0.0001522477,0.00002243078,0.0000288417,0.00002689412,0.0001299445,0.0001722332],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000670145,"about_ca_system_score_gemma":0.00006331335,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003477911,"about_ca_topic_score_gemma":0.00000705683,"domain_scores_codex":[0.9992727,0.00002080435,0.0001458546,0.0001392612,0.0002580387,0.0001633291],"domain_scores_gemma":[0.9994364,0.00001643633,0.00003740902,0.0002044099,0.0002175229,0.00008786184],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001636579,0.0009624285,0.6596721,0.0001072963,0.00008575118,0.00001412308,0.0002769092,0.000004680817,0.3327959,0.000002887463,0.002528514,0.003385703],"study_design_scores_gemma":[0.002276169,0.001228823,0.4332983,0.00006246456,0.00005109325,0.000002759728,0.00004482826,0.0004058068,0.5620567,0.0001050979,0.0003833436,0.00008453854],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985079,0.0002591065,6.30392e-7,0.000123646,0.00004659559,0.0005906271,0.00001596652,0.00001031503,0.0004452279],"genre_scores_gemma":[0.9987128,0.0001576229,0.0006145709,0.00005009287,0.00004236851,0.00002061426,0.0001348825,0.00001272624,0.0002542546],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2292608,"threshold_uncertainty_score":0.2369948,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02797501724465079,"score_gpt":0.2784829746101685,"score_spread":0.2505079573655177,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}