{"id":"W1984763227","doi":"10.1136/sextrans-2012-050573","title":"Self-collected swabs of the urinary meatus diagnose more<i>Chlamydia trachomatis</i>and<i>Neisseria gonorrhoeae</i>infections than first catch urine from men","year":2012,"lang":"en","type":"article","venue":"Sexually Transmitted Infections","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hamilton Health Sciences; McMaster University; St. Joseph’s Healthcare Hamilton","funders":"","keywords":"Chlamydia trachomatis; Medicine; Neisseria gonorrhoeae; Urine; Chlamydia; Cotton swab; Gynecology; Urine sample; Urinary system; Internal medicine; Microbiology; Pathology; Biology; Immunology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004959642,0.000518946,0.0005943581,0.0004929487,0.001545771,0.00005300316,0.0003964459,0.0005187094,0.001116976],"category_scores_gemma":[0.0003987026,0.0004289636,0.0002917284,0.001920301,0.0006615613,0.0006292259,0.000147989,0.001289088,0.0002480082],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000206387,"about_ca_system_score_gemma":0.0002544064,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005523225,"about_ca_topic_score_gemma":0.001581851,"domain_scores_codex":[0.9967586,0.0007591358,0.0007617918,0.0006894507,0.0001026872,0.0009283447],"domain_scores_gemma":[0.9968691,0.001244567,0.0002491795,0.001139179,0.0003482108,0.0001497468],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000148007,0.01077054,0.8627328,0.0001553633,0.002997746,0.000002244914,0.01103822,0.0001658321,0.1061826,0.0006512235,0.003600913,0.001554516],"study_design_scores_gemma":[0.00183965,0.0004228,0.9386616,0.0000472498,0.0005011022,0.0005178406,0.0004580877,0.00002665363,0.0208267,0.0001893641,0.03604447,0.0004644799],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9851917,0.002667662,0.0006316418,0.0007664451,0.001728895,0.001586048,0.0003179834,0.0005314401,0.006578182],"genre_scores_gemma":[0.9961557,0.0008802373,0.0001904045,0.00004887353,0.0002120886,0.0006664976,0.0001751443,0.00008414051,0.001586952],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08535588,"threshold_uncertainty_score":0.9998162,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009635245872328954,"score_gpt":0.2498995804883516,"score_spread":0.2402643346160227,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}