{"id":"W1984874807","doi":"10.1128/jvi.00637-11","title":"The Genome of Yoka Poxvirus","year":2011,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria","funders":"National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; U.S. Public Health Service; National Institutes of Health","keywords":"Biology; Poxviridae; Orthopoxvirus; Genome; Contig; Virology; Phylogenetic tree; Genetics; DNA sequencing; Vaccinia; Evolutionary biology; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007325881,0.00008081386,0.0002610306,0.0001124575,0.0001055579,0.000003053161,0.0004935465,0.0001635064,0.0007783144],"category_scores_gemma":[0.0001906929,0.00004643111,0.0001433875,0.00006801284,0.0005284168,0.00005585789,0.00008130753,0.0004453769,0.0002228026],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001432451,"about_ca_system_score_gemma":0.00009914669,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004717135,"about_ca_topic_score_gemma":0.00002116414,"domain_scores_codex":[0.9988375,0.0002825604,0.0004447244,0.00007089498,0.00004283258,0.0003214278],"domain_scores_gemma":[0.9990469,0.0002163082,0.000369623,0.0001898297,0.0001430216,0.00003435713],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001786745,0.0001428341,0.00205037,0.000004682406,0.0004249046,0.00005086678,0.0006473876,9.822091e-7,0.9798699,0.00255315,0.002372595,0.01009561],"study_design_scores_gemma":[0.003221991,0.004318682,0.1871408,0.00001410406,0.0001082952,0.002315364,0.0004086758,0.00000119809,0.2895111,0.007090751,0.5056877,0.0001813436],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9785694,0.01245655,0.0001376014,0.0003810771,0.0007413508,0.0000648202,0.00001026391,0.000005188318,0.007633674],"genre_scores_gemma":[0.9978192,0.001068529,0.00007322709,0.0001542039,0.00005441716,0.000001189644,9.523903e-7,0.000007056325,0.0008212635],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6903588,"threshold_uncertainty_score":0.8521996,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03066773750317599,"score_gpt":0.2585659788758679,"score_spread":0.2278982413726919,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}