{"id":"W1984931121","doi":"10.1371/journal.pone.0013033","title":"Genomic Analysis of Carbon Monoxide Utilization and Butanol Production by Clostridium carboxidivorans Strain P7T","year":2010,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Biofuel production and bioconversion","field":"Engineering","cited_by":141,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Biotechnology Research Institute","funders":"Natural Resources Canada","keywords":"Clostridium acetobutylicum; Metabolic engineering; Butanol; Isobutanol; Metabolic pathway; Clostridium; Chemistry; Carbon fixation; Biochemistry; Biology; Genetics; Gene; Bacteria; Alcohol; Ethanol","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001733078,0.0005611375,0.0004693609,0.0008493444,0.0002182306,0.0004450311,0.0004145686,0.0004643197,0.0007662913],"category_scores_gemma":[0.0005632263,0.000178849,0.0007445584,0.001152324,0.0002459447,0.0001866403,0.0004301835,0.0007802255,0.0004602087],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002558434,"about_ca_system_score_gemma":0.0005531094,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004443403,"about_ca_topic_score_gemma":0.001824288,"domain_scores_codex":[0.9996876,0.0000319991,0.00002505354,0.00007320107,0.0001089432,0.0000733509],"domain_scores_gemma":[0.9995838,0.000124218,0.00006922097,0.00003527637,0.0001022408,0.00008530101],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001992175,0.0001479857,0.001756014,0.00008456527,0.00002402249,0.0002658161,0.00005343347,0.0001894587,0.9928532,0.000071459,0.0000631622,0.004291594],"study_design_scores_gemma":[0.0001021632,0.002312786,0.1837444,0.00004757992,0.0003424108,0.003614519,0.0009875846,0.004931019,0.7981083,0.0003528887,0.005377242,0.00007904516],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9905789,0.0004509179,0.003013275,0.0001393998,0.00002916546,0.00009517404,0.00441967,0.00007059337,0.001202802],"genre_scores_gemma":[0.9635855,0.0007786521,0.00777825,0.0001215422,0.00003184247,0.0001206766,0.0258387,0.000094384,0.001650526],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004443403,"threshold_uncertainty_score":0.008835077,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02208120774103779,"score_gpt":0.1933415226324958,"score_spread":0.171260314891458,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}