{"id":"W1984951050","doi":"10.1186/1471-2229-10-273","title":"Gene family structure, expression and functional analysis of HD-Zip III genes in angiosperm and gymnosperm forest trees","year":2010,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":72,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; Laurentian University; Université Laval","funders":"Fonds Québécois de la Recherche sur la Nature et les Technologies; Canada's Michael Smith Genome Sciences Centre; Genome Canada","keywords":"Gymnosperm; Biology; Xylem; Cambium; Populus trichocarpa; Gene family; Botany; Vascular cambium; Phylogenetic tree; Gene; White (mutation); Woody plant; Leucine zipper; Gene expression; Genetics; Transcription factor","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001872632,0.0001374441,0.000332389,0.0001015024,0.00007521047,0.00001227311,0.0001376686,0.00028538,0.00008482392],"category_scores_gemma":[0.00004340641,0.00005415257,0.00005861798,0.000314426,0.0002472592,0.0000326416,0.0001384051,0.0001591098,8.294236e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004261967,"about_ca_system_score_gemma":0.00001136334,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005952636,"about_ca_topic_score_gemma":0.0397546,"domain_scores_codex":[0.9989502,0.0001091651,0.0002161717,0.0003803564,0.00008566126,0.0002584908],"domain_scores_gemma":[0.999414,0.0003362794,0.00007552542,0.00006434997,0.00003106571,0.00007881849],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00007191152,0.00001281293,0.4626508,0.000001182209,0.00003169346,0.000002956226,0.000006223534,0.00000341486,0.5361244,0.0001039133,0.00001361104,0.000977046],"study_design_scores_gemma":[0.0002197881,0.000114544,0.9594251,0.000003406868,0.00004042177,0.00003630043,0.00003076942,0.0003047898,0.03919744,0.0002624506,0.0002513793,0.0001136282],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980253,0.0007084598,0.000006909658,0.00005165715,0.00007210946,0.0001178285,0.0009705486,0.00001197543,0.00003520864],"genre_scores_gemma":[0.9979222,0.0002735918,0.0002344311,0.00004701831,0.00006994444,0.000006858043,0.00142791,7.621924e-7,0.00001723705],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.496927,"threshold_uncertainty_score":0.9777674,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02405599434801365,"score_gpt":0.2347125823586053,"score_spread":0.2106565880105917,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}