{"id":"W1985059684","doi":"10.1016/j.funbio.2012.01.010","title":"A molecular phylogeny of thermophilic fungi","year":2012,"lang":"en","type":"article","venue":"Fungal Biology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":137,"is_retracted":false,"has_abstract":false,"ca_institutions":"Concordia University","funders":"Natural Sciences and Engineering Research Council of Canada; Broad Institute","keywords":"Biology; Thermophile; Phylogenetics; Phylogenetic tree; Internal transcribed spacer; Ribosomal RNA; Genetics; Ribosomal DNA; Genome; Botany; Evolutionary biology; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001293182,0.0001466107,0.0001743626,0.00004164309,0.00003039728,0.000002689175,0.0001720008,0.0001823373,0.00005946054],"category_scores_gemma":[0.00006232157,0.0001247217,0.0001392683,0.00007151221,0.00009596656,0.000002402462,0.0001012772,0.00005598962,0.00003319308],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004278225,"about_ca_system_score_gemma":0.00003077651,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006227128,"about_ca_topic_score_gemma":0.000001460372,"domain_scores_codex":[0.9990997,0.00009548557,0.0001762518,0.0002133498,0.00005460743,0.0003606319],"domain_scores_gemma":[0.9994348,0.00001535508,0.00007645682,0.0003026272,0.00004450664,0.0001261994],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007143726,0.0000991371,0.07620025,0.00001131348,0.00006476383,0.000002468562,0.00001153738,0.00000303821,0.9198535,0.001751646,0.0002515227,0.001679406],"study_design_scores_gemma":[0.0003832889,0.0004530821,0.1868593,0.000007741935,0.0000487341,0.00008036606,0.00002509384,0.000008045947,0.7903782,0.0001466396,0.02130787,0.0003015825],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9832846,0.01227414,0.0002928675,0.00001164094,0.0002145483,0.0001105866,0.0006761613,0.00001134806,0.003124096],"genre_scores_gemma":[0.9987226,0.0001475699,0.0001758504,0.0002574308,0.0002755706,0.00001597282,0.0003200545,0.00001576788,0.00006923674],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1294753,"threshold_uncertainty_score":0.5086002,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01010811871892476,"score_gpt":0.2403214527455114,"score_spread":0.2302133340265867,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}