{"id":"W1985064150","doi":"10.4161/mge.1.3.18448","title":"Mobile genetic elements in the genus Bacteroides, and their mechanism(s) of dissemination","year":2011,"lang":"en","type":"article","venue":"Mobile Genetic Elements","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Canadian Food Inspection Agency; U.S. Department of Veterans Affairs; U.S. Department of Agriculture","keywords":"Mobile genetic elements; Bacteroides; Biology; Gene; Microbiome; Antibiotics; Mechanism (biology); Microbiology; Commensalism; Bacteria; Genetics; Genome","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002880685,0.0002505329,0.0002119678,0.0008908079,0.000457612,0.0006973356,0.0002835136,0.0008053331,0.000534341],"category_scores_gemma":[0.0003717157,0.0001608379,0.0000983252,0.0005852713,0.000706415,0.0009977296,0.0004864406,0.0003728822,0.0002708717],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003947865,"about_ca_system_score_gemma":0.0003840974,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001485439,"about_ca_topic_score_gemma":0.001039607,"domain_scores_codex":[0.9998782,0.0000363431,0.000008604855,0.0000234444,0.0000277529,0.00002562976],"domain_scores_gemma":[0.9998616,0.00002609085,0.00006070478,0.00000681335,0.00001533311,0.00002943652],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004703961,0.0000966216,0.01339273,0.0008344764,0.00002332982,0.001085235,0.001301598,0.001165637,0.8672711,0.02735104,0.0004168311,0.08659094],"study_design_scores_gemma":[0.0001869239,0.004107258,0.3256907,0.001281684,0.0002404092,0.01344227,0.01038378,0.00789125,0.357045,0.08561396,0.1937789,0.0003378644],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8226716,0.1522309,0.01153685,0.002146826,0.0001566075,0.00005033827,0.0001642609,0.00009883814,0.01094371],"genre_scores_gemma":[0.9612755,0.03013079,0.005705963,0.00008950762,0.00005762486,0.00002904851,0.0001133089,0.000006042343,0.002592245],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001485439,"threshold_uncertainty_score":0.002953649,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00984176097442543,"score_gpt":0.2316124676508888,"score_spread":0.2217707066764634,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}