{"id":"W1985579861","doi":"10.1016/j.jmb.2012.07.022","title":"Investigating Terephthalate Biodegradation: Structural Characterization of a Putative Decarboxylating cis-Dihydrodiol Dehydrogenase","year":2012,"lang":"en","type":"article","venue":"Journal of Molecular Biology","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":13,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biodegradation; Enzyme; Dehydrogenase; Biochemistry; In silico; Chemistry; Substrate (aquarium); Alcohol oxidoreductase; Stereochemistry; Biology; Gene; Organic chemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005082397,0.0001285516,0.0002737654,0.0001319356,0.00006190803,0.00001562926,0.0001297903,0.0001080334,0.00005464426],"category_scores_gemma":[0.0002357478,0.00009872073,0.00009182705,0.0001654088,0.0001102705,0.0002945712,0.00003881805,0.0001355808,0.000003183962],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003186411,"about_ca_system_score_gemma":0.00005120985,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007518513,"about_ca_topic_score_gemma":4.015048e-7,"domain_scores_codex":[0.9986778,0.0002449859,0.000590747,0.0001153844,0.000150945,0.000220114],"domain_scores_gemma":[0.9984761,0.00004682396,0.001060542,0.0001119901,0.0002042114,0.0001002808],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000208944,0.000007927216,0.009224845,0.000014901,0.0000269374,0.000003440907,0.0004813683,0.00005236424,0.9884191,0.0004705405,0.000001152178,0.001276599],"study_design_scores_gemma":[0.0002849588,0.0002138448,0.006085793,0.00002726447,0.00004149606,0.0002607227,0.00004926623,0.0002173762,0.9916295,0.001069929,0.00002163377,0.00009822519],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9809948,0.0001834766,0.01797075,0.00006585242,0.0006270322,0.00007408654,0.0000173339,0.000009266704,0.0000573753],"genre_scores_gemma":[0.9920024,0.000004518779,0.007579873,0.0001011103,0.0002616254,0.0000014044,0.00003485875,0.00001099394,0.000003263838],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01100753,"threshold_uncertainty_score":0.4025715,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01371940022137687,"score_gpt":0.2787176844086069,"score_spread":0.26499828418723,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}