{"id":"W1985638105","doi":"10.1110/ps.062737507","title":"Structural context for protein <i>N</i>‐glycosylation in bacteria: The structure of PEB3, an adhesin from <i>Campylobacter jejuni</i>","year":2007,"lang":"en","type":"article","venue":"Protein Science","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":true,"ca_institutions":"Biotechnology Research Institute; Institute for Biological Sciences; McGill University","funders":"Biological and Environmental Research; Basic Energy Sciences; National Center for Research Resources; Canadian Institutes of Health Research; National Institutes of Health; U.S. Department of Energy","keywords":"Campylobacter jejuni; Context (archaeology); Periplasmic space; Biochemistry; Chemistry; Protein folding; Glycosylation; Dimer; Protein structure; Bacterial adhesin; Biology; Bacteria; Escherichia coli; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006996511,0.0001666461,0.0001445399,0.00008942785,0.0002531296,0.0002535566,0.0001956956,0.0002737723,0.0007605456],"category_scores_gemma":[0.0001739111,0.00008884255,0.0001731554,0.0001749793,0.0002357493,0.0001724498,0.0001467715,0.0004666189,0.0002274754],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004083402,"about_ca_system_score_gemma":0.0004220471,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003083198,"about_ca_topic_score_gemma":0.003175623,"domain_scores_codex":[0.9999568,0.000008032927,0.000002851669,0.00001135697,0.00001134191,0.000009565071],"domain_scores_gemma":[0.9999145,0.00001231892,0.00002969518,0.000007982834,0.0000112773,0.00002418943],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002495272,0.00005304696,0.003789312,0.00008105993,0.000007726583,0.00038914,0.00009171954,0.0006400617,0.9919481,0.0006754621,0.0001472842,0.00192766],"study_design_scores_gemma":[0.0000931402,0.0006064067,0.1480825,0.00009672016,0.00008986142,0.003649162,0.0006248097,0.01135503,0.8209497,0.002117574,0.01228695,0.00004818489],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9963714,0.0005971902,0.001697116,0.0001276794,0.00001393915,0.000007385639,0.0001229618,0.00002060828,0.001041849],"genre_scores_gemma":[0.9976764,0.0001930362,0.001335008,0.000059789,0.000004816367,0.00000357976,0.0003997879,0.000005999201,0.0003217069],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003083198,"threshold_uncertainty_score":0.006130517,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01204796702554319,"score_gpt":0.2510215789167703,"score_spread":0.2389736118912271,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}