{"id":"W1985987305","doi":"10.1534/genetics.109.113480","title":"The Rim101p/PacC Pathway and Alkaline pH Regulate Pattern Formation in Yeast Colonies","year":2009,"lang":"en","type":"article","venue":"Genetics","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":true,"ca_institutions":"Nickel Institute","funders":"National Institute of General Medical Sciences; National Institutes of Health; University of Missouri-Kansas City; University of Missouri","keywords":"Biology; Saccharomyces cerevisiae; Spore; Yeast; Mutant; Cell; Multicellular organism; Cell biology; Sporogenesis; Meiosis; Genetics; Microbiology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001749579,0.0001099385,0.0000807537,0.00003275939,0.0001108807,0.00005801831,0.0001585598,0.00009759451,0.000004962667],"category_scores_gemma":[0.00002815279,0.00008466998,0.00002902601,0.00007927998,0.00007475381,0.000002767669,0.00009579496,0.00008752904,0.00001347093],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009603407,"about_ca_system_score_gemma":0.00002785235,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006729987,"about_ca_topic_score_gemma":0.0002730908,"domain_scores_codex":[0.9991586,0.00005654065,0.0001779505,0.0001863108,0.0001470805,0.0002735311],"domain_scores_gemma":[0.9995645,0.000009313739,0.00004172141,0.000255037,0.00006387784,0.0000655139],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005259565,0.00003400135,0.001742154,0.00001098055,0.00000860866,0.00000457627,0.000120743,0.000183616,0.9167109,0.00004455589,0.0009751577,0.08011217],"study_design_scores_gemma":[0.0007117173,0.0005977157,0.0390996,0.00001776497,0.000005785373,0.00003275352,0.0001307104,0.002081633,0.895358,0.0007792114,0.06096856,0.0002165836],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954522,0.002558848,0.0003196491,0.000837182,0.00005453161,0.0001729644,0.00001541881,0.000005662526,0.0005835219],"genre_scores_gemma":[0.9959755,0.002882392,0.0001851243,0.0002118574,0.0001316492,0.000009098658,0.00004762366,0.000009820371,0.0005469273],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07989558,"threshold_uncertainty_score":0.3452742,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01062714524175233,"score_gpt":0.2535556266427216,"score_spread":0.2429284814009692,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}