{"id":"W1986059219","doi":"10.1371/journal.ppat.1000447","title":"The Urokinase Receptor (uPAR) Facilitates Clearance of Borrelia burgdorferi","year":2009,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"ZonMw","keywords":"Urokinase receptor; Borrelia burgdorferi; In vivo; Biology; Receptor; In vitro; Molecular biology; Microbiology; Immunology; Antibody","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001393955,0.0001839962,0.0002564342,0.00004896137,0.0002726123,0.00001353129,0.0002619583,0.0001378652,0.0003780752],"category_scores_gemma":[0.0004451683,0.0001360784,0.0001563723,0.0001678681,0.0002623112,0.00005799035,0.00003661634,0.0001953832,0.0009476866],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000306046,"about_ca_system_score_gemma":0.00005349119,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002109937,"about_ca_topic_score_gemma":0.000008263035,"domain_scores_codex":[0.9987741,0.0002011149,0.0003112025,0.0002750728,0.00005333691,0.0003852449],"domain_scores_gemma":[0.9989848,0.000237395,0.0001303331,0.0004747512,0.0001381356,0.00003455433],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002681315,0.0003869981,0.005666732,0.00001361209,0.0001451432,0.000005642798,0.0003053081,0.000009480471,0.9780074,0.0006349972,0.007703158,0.006853423],"study_design_scores_gemma":[0.001620668,0.001674261,0.2334563,0.0001029461,0.0002371515,0.00004167124,0.0005032174,0.00001614204,0.6201336,0.001022295,0.1405706,0.0006210949],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9885045,0.008909786,0.00001850886,0.0003763437,0.0004354057,0.0002703136,0.0003276027,0.0001450189,0.001012464],"genre_scores_gemma":[0.9981092,0.0004389838,0.00003512448,0.0001656925,0.00003691711,0.00002330047,0.00004964557,0.00001449894,0.001126692],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3578737,"threshold_uncertainty_score":0.9998302,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01100139040410094,"score_gpt":0.2236038234723403,"score_spread":0.2126024330682393,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}