{"id":"W1986349488","doi":"10.1155/2014/329049","title":"Natural Selection Determines Synonymous Codon Usage Patterns of Neuraminidase (NA) Gene of the Different Subtypes of Influenza A Virus in Canada","year":2014,"lang":"en","type":"article","venue":"Journal of Viruses","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; University of British Columbia","funders":"China Scholarship Council","keywords":"Phylogenetic tree; Biology; Natural selection; Codon usage bias; Gene; Clade; Neuraminidase; Genetics; Selection (genetic algorithm); Phylogenetics; Evolutionary biology; Virus; Genome; Artificial intelligence; Computer science","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002182036,0.0001634903,0.0002507996,0.0008203131,0.0007514646,0.0005960029,0.000218122,0.000153001,0.0006353454],"category_scores_gemma":[0.0006618712,0.0001090571,0.0004026842,0.00148444,0.0002846837,0.0001011982,0.000213942,0.0002385221,0.0001226988],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002422994,"about_ca_system_score_gemma":0.002625122,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.6011507,"about_ca_topic_score_gemma":0.7412259,"domain_scores_codex":[0.9997197,0.00002861077,0.00001911211,0.00008825245,0.00007349877,0.00007082504],"domain_scores_gemma":[0.9996547,0.00006280677,0.00005406599,0.00001873086,0.0001434056,0.00006630946],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005221808,0.00003041873,0.8848451,0.00007190584,0.0002410636,0.0002957003,0.001063652,0.001682331,0.09345229,0.0003521407,0.0004697192,0.01697344],"study_design_scores_gemma":[0.000005108137,0.00003060947,0.9942254,0.000006763401,0.00004158718,0.0001428719,0.0005537841,0.001991465,0.002190787,0.00004889473,0.0007488573,0.00001403187],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989202,0.0001149842,0.0001424816,0.00001132038,0.000001757476,0.00000340919,0.0003942118,0.000003532621,0.0004080764],"genre_scores_gemma":[0.9981956,0.000118949,0.0004060601,0.00001408031,0.000001195352,0.000003956389,0.0009718114,0.000005501044,0.0002829894],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3988493,"threshold_uncertainty_score":0.8023964,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04266735947966458,"score_gpt":0.3222950700363254,"score_spread":0.2796277105566608,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}