{"id":"W1986463939","doi":"10.1128/aem.01657-07","title":"Epidemiology, Relative Invasive Ability, Molecular Characterization, and Competitive Performance of <i>Campylobacter jejuni</i> Strains in the Chicken Gut","year":2007,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health Canada; Institute for Biological Sciences","funders":"","keywords":"Biology; Campylobacter jejuni; Microbiology; Flagellin; Virulence; Population; Pathogen; Typing; Campylobacter; Strain (injury); Genome; Bacteria; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000312075,0.0003552712,0.0002880693,0.0009007333,0.0002903006,0.000535278,0.0002794346,0.00049016,0.0004874664],"category_scores_gemma":[0.0009405226,0.0003243925,0.0002282167,0.0005801282,0.0006174766,0.0003058075,0.0002205071,0.0003094035,0.0001269241],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004683104,"about_ca_system_score_gemma":0.0001859172,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01771032,"about_ca_topic_score_gemma":0.015088,"domain_scores_codex":[0.9995061,0.00005387253,0.00004969292,0.0001671058,0.000131353,0.00009193095],"domain_scores_gemma":[0.9990753,0.0001647316,0.0003491594,0.00004463379,0.000180797,0.0001853862],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006350919,0.0001228491,0.8198645,0.00008158475,0.00006474926,0.0003390341,0.0006637973,0.0001523916,0.1740371,0.00003534717,0.00008589581,0.003917603],"study_design_scores_gemma":[0.000006378783,0.0004809461,0.9953501,0.000006072728,0.000020247,0.0009020182,0.000329788,0.000152011,0.002569302,0.000008593863,0.0001677677,0.000006738147],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9996797,0.00009809771,0.00005054942,0.000007098716,7.218902e-7,0.000004063063,0.00006236469,0.000001106104,0.00009639603],"genre_scores_gemma":[0.9993593,0.00009198391,0.0001734831,0.00001383651,0.00000243667,0.00000626036,0.0002569512,0.000001151459,0.00009474455],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01771032,"threshold_uncertainty_score":0.03521448,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01050790215788968,"score_gpt":0.1977593864200724,"score_spread":0.1872514842621827,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}