{"id":"W1987077730","doi":"10.1111/j.1462-5822.2005.00509.x","title":"Autophagy is an immediate macrophage response to Legionella pneumophila","year":2005,"lang":"en","type":"article","venue":"Cellular Microbiology","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":277,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; College of Medicine, University of Florida; National Institute of Allergy and Infectious Diseases; Tufts University School of Medicine; National Institutes of Health","keywords":"Autophagy; Vacuole; Phagosome; Legionella pneumophila; ATG8; Biology; Legionella; Microbiology; Cell biology; Macrophage; Endoplasmic reticulum; Phagocytosis; Secretion; Lysosome; Apoptosis; Biochemistry; Enzyme; In vitro; Bacteria; Cytoplasm","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017844,0.0003095652,0.0002289415,0.0001627496,0.0002234617,0.0002728956,0.00008988858,0.0003293087,0.0009103743],"category_scores_gemma":[0.0001040263,0.0001010272,0.0001996829,0.0001098071,0.0002949057,0.0002192684,0.0002356242,0.0002997249,0.0003477358],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002820206,"about_ca_system_score_gemma":0.0002011088,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002425166,"about_ca_topic_score_gemma":0.0003550219,"domain_scores_codex":[0.999831,0.00003044552,0.00001433177,0.00003918894,0.00004337998,0.00004169592],"domain_scores_gemma":[0.9999298,0.00001049731,0.00001887951,0.00001017281,0.00001479009,0.00001596478],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00009087071,0.000009047022,0.0004892689,0.00003680637,0.000002232182,0.0001195249,0.00001967222,0.00001564414,0.9982738,0.0000927016,0.000041163,0.0008090787],"study_design_scores_gemma":[0.00001607783,0.0004131812,0.01967228,0.00001571204,0.00001539117,0.001019419,0.0001073485,0.000303455,0.97337,0.0002286227,0.004829769,0.000008642873],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9877528,0.005317566,0.003269946,0.0002987079,0.00007286135,0.00004475448,0.000278888,0.0002345488,0.002729846],"genre_scores_gemma":[0.9942967,0.001463384,0.001326386,0.0001006213,0.0000257564,0.00002679129,0.0002113989,0.00001213686,0.002536809],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009103743,"threshold_uncertainty_score":0.003045499,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01214002215081722,"score_gpt":0.2602465468689429,"score_spread":0.2481065247181257,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}