{"id":"W1987240370","doi":"10.1093/gbe/evq014","title":"The Exceptionally Large Chloroplast Genome of the Green Alga Floydiella terrestris Illuminates the Evolutionary History of the Chlorophyceae","year":2010,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":119,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Genome; Chloroplast DNA; Group II intron; Genetics; Inverted repeat; Lineage (genetic); Chlorophyceae; Group I catalytic intron; Phylogenetic tree; Gene; Intron; Evolutionary biology; Botany; RNA splicing; Algae; Chlorophyta; RNA","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007652368,0.0002586133,0.0002143424,0.0004568114,0.0003453141,0.0003563523,0.0001937456,0.0002893147,0.0007283301],"category_scores_gemma":[0.0002273386,0.000107633,0.0001954399,0.0003615423,0.0001777221,0.0003169118,0.0003619216,0.0002820505,0.0003062206],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001542352,"about_ca_system_score_gemma":0.0002422125,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001005445,"about_ca_topic_score_gemma":0.001441876,"domain_scores_codex":[0.9999391,0.000003237001,0.000004453768,0.00002722847,0.0000172298,0.000008696186],"domain_scores_gemma":[0.9998432,0.00002694945,0.00004178576,0.0000190192,0.00002435042,0.0000445982],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00008957858,0.00002591937,0.01932349,0.0002377974,0.00003645901,0.0005747506,0.0002407006,0.0001862571,0.958276,0.0002545736,0.000220238,0.02053431],"study_design_scores_gemma":[0.00003713429,0.0004506684,0.7717695,0.0001344139,0.000200951,0.007480897,0.001101684,0.001448211,0.178694,0.001256607,0.03737017,0.00005576016],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9937543,0.00170642,0.001523531,0.0001099698,0.00001582256,0.000006753082,0.001968169,0.00009193256,0.0008230333],"genre_scores_gemma":[0.9818092,0.001431397,0.005728832,0.00008076449,0.00003316376,0.00001834902,0.009835639,0.00002678067,0.001035927],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001005445,"threshold_uncertainty_score":0.002436519,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00471694963921484,"score_gpt":0.1894076661578661,"score_spread":0.1846907165186513,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}