{"id":"W1987627532","doi":"10.1007/s12686-012-9649-y","title":"Using next-generation DNA sequencing for rapid microsatellite discovery in Mexican leaf-toed geckos (Phyllodactylus tuberculosus)","year":2012,"lang":"en","type":"article","venue":"Conservation Genetics Resources","topic":"Amphibian and Reptile Biology","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":false,"ca_institutions":"Royal Ontario Museum; University of Toronto","funders":"Trent University","keywords":"Microsatellite; Biology; Pyrosequencing; Linkage disequilibrium; Shotgun sequencing; Genetics; Loss of heterozygosity; DNA sequencing; Evolutionary biology; Allele; Genotype; Single-nucleotide polymorphism; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003839651,0.0001711481,0.0001815918,0.00007035051,0.0001795872,0.00008084971,0.0001312893,0.0001489211,0.0001270464],"category_scores_gemma":[0.00005382853,0.0001600875,0.00007112039,0.0002024995,0.0002200705,0.0003256824,0.00008852767,0.00008023573,0.00001875604],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002843211,"about_ca_system_score_gemma":0.00002995811,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002610721,"about_ca_topic_score_gemma":0.0003947317,"domain_scores_codex":[0.9986405,0.000122746,0.0003643035,0.0003105706,0.0001524419,0.0004094014],"domain_scores_gemma":[0.9994287,0.00008168587,0.0001512262,0.0002258147,0.00001626286,0.00009624788],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002436496,0.00002740803,0.1991865,0.00001089869,0.000008305114,6.435178e-7,0.001338312,0.00157018,0.7935691,0.00002224797,0.0001585137,0.004083525],"study_design_scores_gemma":[0.00150467,0.0002009676,0.4256639,0.00005811681,0.00007589613,0.00004563011,0.001634137,0.1756466,0.305754,0.0002157063,0.0882039,0.00099642],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953364,0.0009087331,0.002494496,0.0002048533,0.0002186253,0.0004305727,0.00001457902,0.00002189758,0.0003698607],"genre_scores_gemma":[0.9917263,0.0001081203,0.006615485,0.0008010725,0.0002842294,0.00002626905,0.0000610868,0.00002345941,0.0003539861],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4878151,"threshold_uncertainty_score":0.6528179,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09809112368938602,"score_gpt":0.2788366274859762,"score_spread":0.1807455037965902,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}