{"id":"W1987689210","doi":"10.1111/j.1529-8817.2008.00510.x","title":"DEEP DIVISION IN THE CHLOROPHYCEAE (CHLOROPHYTA) REVEALED BY CHLOROPLAST PHYLOGENOMIC ANALYSES<sup>1</sup>","year":2008,"lang":"en","type":"article","venue":"Journal of Phycology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":83,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"","keywords":"Biology; Chlorophyceae; Monophyly; Botany; Clade; Phylogenetic tree; Chlorophyta; Gene; Algae; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001133651,0.0001513396,0.0001359311,0.0004462884,0.0002808178,0.0003953126,0.00008732603,0.0002171575,0.0006564088],"category_scores_gemma":[0.0001897581,0.000136569,0.0002060172,0.0003932827,0.0001969424,0.0001910303,0.0003897146,0.0003964722,0.0002875362],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001420659,"about_ca_system_score_gemma":0.0002422361,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001814144,"about_ca_topic_score_gemma":0.002786899,"domain_scores_codex":[0.9999009,0.000008170518,0.000006510814,0.00003980259,0.00001758508,0.00002690801],"domain_scores_gemma":[0.9998468,0.00003114578,0.00003706881,0.0000141753,0.00002377817,0.00004709821],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0001344773,0.00001755529,0.04645231,0.00005070852,0.00002303103,0.00009908419,0.0002163886,0.0001290649,0.9460364,0.0001036759,0.0000428719,0.006694476],"study_design_scores_gemma":[0.000007509307,0.0001163087,0.9651716,0.00002371488,0.00004752414,0.0006202956,0.0006037335,0.0006427377,0.02912382,0.0002419834,0.003388057,0.00001262723],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977511,0.0003646719,0.00085637,0.00004260725,0.00000152756,0.000006408565,0.0004869829,0.00000905972,0.0004813617],"genre_scores_gemma":[0.9934068,0.0004527532,0.002571823,0.00008988127,0.000002987734,0.00001987605,0.002782339,0.00001351933,0.0006600846],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001814144,"threshold_uncertainty_score":0.003607154,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02056261063758608,"score_gpt":0.2626302214652078,"score_spread":0.2420676108276217,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}