{"id":"W1988146307","doi":"10.1128/aac.01534-13","title":"Genotypic Analysis of the V3 Region of HIV from Virologic Nonresponders to Maraviroc-Containing Regimens Reveals Distinct Patterns of Failure","year":2013,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"AIDS Vancouver","funders":"","keywords":"Maraviroc; CCR5 receptor antagonist; V3 loop; Tissue tropism; Tropism; Population; Biology; Genotyping; Virology; Genotype; Internal medicine; Human immunodeficiency virus (HIV); Medicine; Immunology; Genetics; Virus; Gene; Chemokine; Chemokine receptor; Inflammation","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003715453,0.0001655206,0.0002711575,0.0002858167,0.0001939374,0.0003022075,0.000123884,0.0002025224,0.0005431204],"category_scores_gemma":[0.0009875232,0.0001184039,0.0002760986,0.0001862281,0.0002137416,0.0001427144,0.0001558743,0.0002673433,0.0001444517],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001805473,"about_ca_system_score_gemma":0.0001051143,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009334566,"about_ca_topic_score_gemma":0.001262579,"domain_scores_codex":[0.9997442,0.00006666759,0.0000283695,0.00006065801,0.00004663452,0.00005350239],"domain_scores_gemma":[0.999586,0.0001464868,0.0000978332,0.00005997855,0.00004247717,0.00006723354],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001815518,0.0001451819,0.8457344,0.00004171535,0.00008764454,0.0006101011,0.0005197026,0.0006229227,0.1223039,0.00007895689,0.0002216095,0.02781839],"study_design_scores_gemma":[0.00004650336,0.001557021,0.9824402,0.000009249467,0.00004238369,0.002032755,0.0002204852,0.001067884,0.01192827,0.00007368487,0.0005704929,0.00001108952],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9997292,0.00005168548,0.00005857167,0.000006216952,5.580713e-7,0.000003246764,0.00004015825,0.000002189389,0.0001082262],"genre_scores_gemma":[0.9996686,0.00002133388,0.00008295417,0.00002709347,0.000001360653,0.000003892582,0.0001303485,0.000001845894,0.00006252747],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009334566,"threshold_uncertainty_score":0.001964927,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01414608507133857,"score_gpt":0.2422608139469651,"score_spread":0.2281147288756265,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}