{"id":"W1988437811","doi":"10.1371/journal.pone.0073066","title":"Multilocus Sequence Typing of Borrelia burgdorferi Suggests Existence of Lineages with Differential Pathogenic Properties in Humans","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":118,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Multilocus sequence typing; Borrelia burgdorferi; Biology; Typing; Lyme disease; Genetics; Population; Borrelia; Intergenic region; Microbiology; Virology; Genotype; Genome; Gene; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001855296,0.0001865188,0.0001783801,0.000569197,0.0001952287,0.0003513336,0.00006787535,0.0001278252,0.0004866646],"category_scores_gemma":[0.0004342907,0.0001059219,0.00009631222,0.0005860544,0.0002162826,0.0001273344,0.0001838007,0.0001517513,0.00009864121],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002064959,"about_ca_system_score_gemma":0.0001880942,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006390652,"about_ca_topic_score_gemma":0.006934257,"domain_scores_codex":[0.999858,0.00002379341,0.00001444497,0.00004676302,0.00002863226,0.00002835485],"domain_scores_gemma":[0.999777,0.0000295336,0.0001140162,0.00001581705,0.00002579878,0.00003789358],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003734424,0.00003756396,0.8986292,0.00004529152,0.00006317504,0.0002677392,0.0005973471,0.0002553246,0.08525022,0.0001039953,0.0001494736,0.01422739],"study_design_scores_gemma":[0.000005966105,0.00009075668,0.9954488,0.00001302458,0.00002664254,0.0005988185,0.0002400021,0.0002499486,0.002689074,0.00004544683,0.0005881403,0.000003492535],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994999,0.0001772454,0.0001513102,0.00001017851,7.092564e-7,0.000001824974,0.00006265157,0.000001764191,0.00009442483],"genre_scores_gemma":[0.9994317,0.0001260345,0.0002201871,0.000006226344,0.000001860892,0.000001434745,0.000155125,7.151107e-7,0.00005674092],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006390652,"threshold_uncertainty_score":0.01270694,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04204373941518794,"score_gpt":0.2253204591182474,"score_spread":0.1832767197030594,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}