{"id":"W1988865197","doi":"10.1093/gbe/evt072","title":"RNA-Seq Analysis of Allele-Specific Expression, Hybrid Effects, and Regulatory Divergence in Hybrids Compared with Their Parents from Natural Populations","year":2013,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":168,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Genetics; Hybrid; Allele; Gene; Gene expression; Heterosis; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002337747,0.0002227663,0.0004333174,0.0005051551,0.0004161169,0.0004593904,0.0002372122,0.0003380405,0.0008358561],"category_scores_gemma":[0.0003842692,0.0001911579,0.0004472372,0.0004627877,0.0002503793,0.0001795266,0.0002986216,0.0006497227,0.0002733368],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003092814,"about_ca_system_score_gemma":0.0001691962,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001481804,"about_ca_topic_score_gemma":0.00337968,"domain_scores_codex":[0.9997408,0.00001304093,0.00001299485,0.0001418762,0.00006150395,0.00002982746],"domain_scores_gemma":[0.9997433,0.00009679895,0.00005179051,0.0000141373,0.00005919949,0.00003470819],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001090693,0.00001270783,0.004478976,0.00008658149,0.00003775157,0.0001172072,0.0002410794,0.0001574409,0.9924906,0.0001209202,0.00009250966,0.002055122],"study_design_scores_gemma":[0.00005532765,0.0003914985,0.6186385,0.00005337906,0.000467402,0.001356158,0.001137935,0.009011141,0.3455208,0.0007062744,0.0225375,0.0001241332],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9847147,0.0006339942,0.006130086,0.00003592144,0.00003547827,0.00003489503,0.006707652,0.0001634729,0.00154382],"genre_scores_gemma":[0.9671497,0.0003875208,0.01194004,0.0002823528,0.00002436858,0.0002105982,0.01640191,0.0003072651,0.003296284],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001481804,"threshold_uncertainty_score":0.002946436,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00909352225104106,"score_gpt":0.2092477139375544,"score_spread":0.2001541916865133,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}