{"id":"W1988908493","doi":"10.1534/genetics.108.090555","title":"Fixation Probability for Lytic Viruses: The Attachment-Lysis Model","year":2008,"lang":"en","type":"article","venue":"Genetics","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"","keywords":"Fixation (population genetics); Lysis; Lytic cycle; Biology; Population; Genetics; Bacteriophage; Chemostat; Virus; Bacteria; Gene; Molecular biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001536553,0.0001274115,0.00009337625,0.00001753129,0.0002200879,0.00001244528,0.0002108233,0.0001137245,0.00000701524],"category_scores_gemma":[0.00005743309,0.0001021767,0.0001147952,0.00007100945,0.0001340554,0.00000152837,0.00005747845,0.00004720856,0.000009311854],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002001679,"about_ca_system_score_gemma":0.0001083108,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000002369815,"about_ca_topic_score_gemma":0.00006536423,"domain_scores_codex":[0.9991243,0.00003484175,0.0002071444,0.0002848658,0.0001315047,0.0002172679],"domain_scores_gemma":[0.9992298,0.00001369489,0.00007287613,0.0004916292,0.0001356964,0.0000562712],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0001953376,0.0003940302,0.02906526,0.00008529835,0.0002241707,7.886526e-7,0.0007099864,0.6552661,0.2726945,0.001528986,0.03670527,0.003130272],"study_design_scores_gemma":[0.001492913,0.0005012379,0.008886237,0.000006389044,0.0001330865,0.00003110655,0.00009395023,0.8675838,0.04715363,0.007182811,0.06634665,0.0005882664],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6721509,0.0004339906,0.3262953,0.0002704591,0.00007016127,0.000456884,0.00004549347,0.00001453215,0.0002623256],"genre_scores_gemma":[0.974022,0.0004558649,0.02277032,0.0008151851,0.0001611641,0.0001096107,0.0001368842,0.00002311947,0.001505827],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.303525,"threshold_uncertainty_score":0.4166644,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03984685231428223,"score_gpt":0.2919925775516494,"score_spread":0.2521457252373671,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}