{"id":"W1988917388","doi":"10.1105/tpc.104.160930","title":"A Renaissance of Metabolite Sensing and Signaling: From Modular Domains to Riboswitches","year":2004,"lang":"en","type":"review","venue":"The Plant Cell","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Organism; The Renaissance; Modular design; Signal transduction; Riboswitch; Extracellular; Computational biology; Metabolite; Cell biology; Cognitive science; Genetics; RNA; Biochemistry; Computer science; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002746832,0.0002874564,0.0007206157,0.00003851498,0.00006256343,0.00002024219,0.0002624787,0.0002270727,0.000005243495],"category_scores_gemma":[0.00003219004,0.0001869429,0.000234929,0.000068246,0.00004668004,0.000001160809,0.0001347257,0.0001049286,0.000009035388],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007610886,"about_ca_system_score_gemma":0.00008564575,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001082582,"about_ca_topic_score_gemma":0.000007112585,"domain_scores_codex":[0.9988508,0.0001379942,0.0003099249,0.0003765635,0.0001240023,0.0002007738],"domain_scores_gemma":[0.9991003,0.00006996311,0.0002345661,0.0004973166,0.00002215915,0.00007563848],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00004317647,0.0000269532,3.699975e-7,0.002615371,0.0003013979,0.00001588766,0.0001433657,0.00002257049,0.8573785,0.00006730976,0.00005508665,0.13933],"study_design_scores_gemma":[0.00009471637,0.00004826109,3.499993e-7,0.002206894,0.0004540168,0.00002159827,0.0000145827,0.000001445429,0.3679659,0.0003361729,0.62862,0.0002360165],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.003523585,0.992787,0.002469868,0.00001549601,0.00007873477,0.0004588858,0.0005158891,0.00000668855,0.0001438309],"genre_scores_gemma":[0.004603296,0.9913273,0.00342638,0.0000431769,0.0001648359,0.00001275863,0.0002504663,0.00004157819,0.0001301808],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.628565,"threshold_uncertainty_score":0.7623308,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02901279976201014,"score_gpt":0.2506414534788642,"score_spread":0.2216286537168541,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}