{"id":"W1989117328","doi":"10.1186/1471-2164-10-260","title":"Gene expression profiling within the spleen of Clostridium perfringens- challenged Broilers fed antibiotic-medicated and non-medicated diets","year":2009,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"ca_institutions":"Nutreco (Canada); Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; China Scholarship Council; Natural Sciences and Engineering Research Council of Canada; Nanjing Agricultural University; Ministry of Education, India; AgResearch; Poultry Industry Council; Australian Government","keywords":"Biology; Clostridium perfringens; Antibiotics; Microbiology; Spleen; Gene expression profiling; DNA microarray; Clostridium; Gene; Gene expression; Bacteria; Genetics; Immunology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008997971,0.000402197,0.000703254,0.0002363331,0.0002771898,0.00004380587,0.0004010308,0.0003298126,0.00004034223],"category_scores_gemma":[0.0004677528,0.0002919173,0.0001784269,0.0004566991,0.0003890079,0.00006529929,0.0002084422,0.0007224235,0.00003011546],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001707656,"about_ca_system_score_gemma":0.000675653,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005117912,"about_ca_topic_score_gemma":0.00001234359,"domain_scores_codex":[0.9969009,0.0001237676,0.0008469611,0.0006887427,0.0007732555,0.000666336],"domain_scores_gemma":[0.9978722,0.0001895995,0.0003538157,0.0008832082,0.000261994,0.0004391248],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001107755,0.0003291189,0.003567602,0.0002304524,0.00009108573,0.00003854728,0.000951406,0.00004831287,0.9911422,0.0000157664,0.0003957328,0.002082075],"study_design_scores_gemma":[0.00283522,0.0009452375,0.01336658,0.0002514703,0.0001721347,0.00008842265,0.001299423,0.003346002,0.9772379,0.00002460849,0.000139231,0.0002937716],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9940919,0.001747335,0.0001110887,0.001715509,0.0001903611,0.001289048,0.00004019691,0.00008749876,0.0007270512],"genre_scores_gemma":[0.9949008,0.001334189,0.002830401,0.0001668518,0.0004082739,0.00001171922,0.0001271569,0.00005910802,0.0001615043],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01390424,"threshold_uncertainty_score":0.9999533,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03294722287086197,"score_gpt":0.284790286479065,"score_spread":0.251843063608203,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}