{"id":"W1989277372","doi":"10.1128/aem.00384-12","title":"Discovery of a <i>trans</i> -Dichloroethene-Respiring Dehalogenimonas Species in the 1,1,2,2-Tetrachloroethane-Dechlorinating WBC-2 Consortium","year":2012,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":60,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Dehalococcoides; Enrichment culture; Biology; Reductive dechlorination; 16S ribosomal RNA; Microbiology; Library; Thermus; Vinyl chloride; Phylotype; Ribosomal RNA; Bacteria; Chemistry; Gene; Thermophile; Biochemistry; Genetics; Ecology; Organic chemistry; Biodegradation","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004561456,0.0002072523,0.0002358639,0.00003804349,0.0000861376,0.00001378876,0.0002341682,0.0001278559,0.0003486218],"category_scores_gemma":[0.000008269682,0.0001502708,0.00005485882,0.000110988,0.0007671867,0.0001575358,0.0001825191,0.0001869056,0.00006198986],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006826199,"about_ca_system_score_gemma":0.00000326349,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006970234,"about_ca_topic_score_gemma":0.00006053254,"domain_scores_codex":[0.9987301,0.00007696135,0.0003660358,0.0002806293,0.00009640773,0.0004499273],"domain_scores_gemma":[0.9994972,0.0001336352,0.0001312371,0.0001866412,6.816236e-7,0.00005060291],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002869754,0.0001366619,0.1441444,0.00000731326,0.000007741681,0.000001309929,0.001368374,0.000006215116,0.8533041,0.0001193141,0.00006902798,0.0008068569],"study_design_scores_gemma":[0.0008404923,0.00007169289,0.3235502,0.000009181846,0.0000263666,0.00007614664,0.002526578,0.000003609563,0.6618528,0.00007703988,0.01064142,0.0003244037],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9967303,0.0002361485,0.00004154005,0.0001082552,0.0001034942,0.0002841145,0.000087286,0.0000103957,0.002398484],"genre_scores_gemma":[0.9988117,0.0001997616,0.0001665987,0.0006051782,0.00004869712,0.0000130223,0.00005942723,0.00001283788,0.00008282574],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1914512,"threshold_uncertainty_score":0.6127864,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01035382933986789,"score_gpt":0.1931877493712734,"score_spread":0.1828339200314055,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}