{"id":"W1989445815","doi":"10.1128/jcm.00112-09","title":"Multiplex Detection of Bacteria Associated with Normal Microbiota and with Bacterial Vaginosis in Vaginal Swabs by Use of Oligonucleotide-Coupled Fluorescent Microspheres","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; University of British Columbia; University of Saskatchewan; Provincial Health Services Authority; University of Manitoba; Canadian Science Centre for Human and Animal Health","funders":"","keywords":"Bacterial vaginosis; Gardnerella vaginalis; Biology; Microbiology; Lactobacillus; Amplicon; Multiplex; Lactobacillus crispatus; Gram staining; Bacteria; Virology; Polymerase chain reaction; Antibiotics; Gene; Bioinformatics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009946048,0.0005908813,0.0006133494,0.0009796059,0.0002460181,0.0006449663,0.0003907873,0.0008460282,0.0006227553],"category_scores_gemma":[0.001055729,0.0003371324,0.0002752127,0.0004821755,0.0003973006,0.0003798262,0.0005852839,0.0004362404,0.0002966747],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003307292,"about_ca_system_score_gemma":0.0002173516,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000365722,"about_ca_topic_score_gemma":0.00053339,"domain_scores_codex":[0.9987857,0.0002131146,0.00007987365,0.0004604912,0.0003172609,0.0001435037],"domain_scores_gemma":[0.9994166,0.0002240811,0.0001442675,0.00003666255,0.00009499319,0.0000835089],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001293084,0.00004795315,0.00158411,0.00005357913,0.00001073605,0.00004363258,0.00006341773,0.0001395662,0.9921808,0.0001021862,0.0000312564,0.005613351],"study_design_scores_gemma":[0.00003719988,0.001460386,0.02156257,0.00002807483,0.00006705455,0.0008582581,0.0001042411,0.008691211,0.9645659,0.0002683868,0.002315234,0.00004146789],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9187984,0.002197286,0.07587637,0.0001222034,0.00008916252,0.0002195946,0.0007013145,0.0005398357,0.001455845],"genre_scores_gemma":[0.8132463,0.001352853,0.1809773,0.0002235136,0.00007877073,0.0004959721,0.001162616,0.00004363171,0.002419111],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009946048,"threshold_uncertainty_score":0.00526005,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0266043178744677,"score_gpt":0.3013465114726203,"score_spread":0.2747421935981526,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}